RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 GPR174Q9BXC1 333 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 FAM126AQ9BYI3 521 aaPredicted RBP14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 PCDH12Q9NPG4 1184 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 ZSCAN32Q9NX65 697 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 GGT7Q9UJ14 662 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 TBC1D3DA0A087WVF3 549 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 TBC1D3IA0A087WXS9 549 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 TBC1D3EA0A087X179 549 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 TBC1D3KA0A087X1G2 549 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 TSPAN11A1L157 253 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 TBC1D3FA6NER0 549 aaPredicted RBP14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 TBC1D3LB9A6J9 549 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 FZD6O60353 706 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 SEMA4FO95754 770 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 PRLP01236 227 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 TBC1D3HP0C7X1 549 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 CHRNA4P43681 627 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 RPL6Q02878 288 aaKnown RBP14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 SLC14A2Q15849 920 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 ZNF528Q3MIS6 628 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 TBC1D3GQ6DHY5 549 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 TBC1D3CQ6IPX1 549 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 USP45Q70EL2 814 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 TBC1D3Q8IZP1 549 aaPredicted RBP14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 NDUFAF2Q8N183 169 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 CEP112Q8N8E3 955 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 PIH1D2Q8WWB5 315 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 FEM1CQ96JP0 617 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 TBL1YQ9BQ87 522 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 WRAP53Q9BUR4 548 aaKnown RBP14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 TRIM31Q9BZY9 425 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 LRRC40Q9H9A6 602 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 SGK2Q9HBY8 427 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 PIH1D1Q9NWS0 290 aaKnown RBP14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 PHTF1Q9UMS5 762 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 NEU2Q9Y3R4 380 aa14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 ARIH1Q9Y4X5 557 aaPredicted RBP14.13□□□□□ -0.15
VIPAS39-208ENST00000556412 NUP205Q92621 2012 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 LRRC72A6NJI9 287 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 SLC7A4O43246 635 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 RAD51CO43502 376 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 PLRG1O43660 514 aaKnown RBP14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 NDST3O95803 873 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 SLC4A1P02730 911 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 PIRTP0C851 137 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 BCKDHBP21953 392 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 TAS2R38P59533 333 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 SEMA5AQ13591 1074 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 PTK6Q13882 451 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 CEP68Q76N32 757 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 MAATS1Q7Z4T9 603 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 CCHCR1Q8TD31 782 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 SLCO2A1Q92959 643 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 RAB7BQ96AH8 199 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 TRIB3Q96RU7 358 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 WSB2Q9NYS7 404 aaPredicted RBP14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 MBD1Q9UIS9 605 aaPredicted RBP14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 FADS3Q9Y5Q0 445 aa14.12□□□□□ -0.15
VIPAS39-208ENST00000556412 GOLGA8CPA6NN73 597 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 PSMD3O43242 534 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 AP2A1O95782 977 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 IGLV3-19P01714 112 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 C7P10643 843 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 NFKBIAP25963 317 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 GRIA4P48058 902 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 RPL26P61254 145 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 ELP6Q0PNE2 266 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 QPCTQ16769 361 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 SIRPB2Q5JXA9 342 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 DENND2CQ68D51 928 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 C8orf74Q6P047 294 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 PPP1R21Q6ZMI0 780 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 SYDE1Q6ZW31 735 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 GAB3Q8WWW8 586 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 SNX19Q92543 992 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 B4GALT6Q9UBX8 382 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 RPL26L1Q9UNX3 145 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 R4GN57 208 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 ATG2BQ96BY7 2078 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 ZDBF2Q9HCK1 2354 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 A0A0U1RQS6 177 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 LOC285095A0A1B0GVY8 99 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 NPIPB15A6NHN6 443 aaPredicted RBP14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 ANKRD66B4E2M5 251 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 RIOK3O14730 519 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 HRO43593 1189 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 FSBPO95073 299 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 ATXN1LP0C7T5 689 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 HLA-DPA1P20036 260 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 MAT2AP31153 395 aaKnown RBP14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 HNF1BP35680 557 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 SLC1A5Q15758 541 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 KCTD11Q693B1 232 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 NAPEPLDQ6IQ20 393 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 SLC36A4Q6YBV0 504 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 ARMCX6Q7L4S7 300 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 TMEFF1Q8IYR6 380 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 DNAAF3Q8N9W5 541 aa14.11□□□□□ -0.15
VIPAS39-208ENST00000556412 PRSS33Q8NF86 280 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms