RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ARNTP27540 789 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 RPL5P46777 297 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 RAB27AP51159 221 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 RENBPP51606 427 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 PGGT1BP53609 377 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 INHBEP58166 350 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 PSME3P61289 254 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 PURAQ00577 322 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 ITKQ08881 620 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 FASTKQ14296 549 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 CSHL1Q14406 222 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 ACAP2Q15057 778 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 TLR1Q15399 786 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 PCSK7Q16549 785 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 MAP7D1Q3KQU3 841 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 MORN1Q5T089 497 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 OVOS1Q6IE37 1185 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 FAM171BQ6P995 826 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 FBXL19Q6PCT2 694 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 KDELC2Q7Z4H8 507 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 RNF135Q8IUD6 432 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 SPATA2LQ8IUW3 424 aaPredicted RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 RNF148Q8N7C7 305 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 RTL3Q8N8U3 475 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 NAT14Q8WUY8 206 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 NCSTNQ92542 709 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 ASB9Q96DX5 294 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 MAELQ96JY0 434 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 FCRL2Q96LA5 508 aaPredicted RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 SERPINB11Q96P15 392 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 NPAS2Q99743 824 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 PTPN18Q99952 460 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 TRMOQ9BU70 441 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 EFHD1Q9BUP0 239 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 MRPS26Q9BYN8 205 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 UNKQ9C0B0 810 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 SLC39A8Q9C0K1 460 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 SLC6A16Q9GZN6 736 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 UNC93B1Q9H1C4 597 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 SLC25A51Q9H1U9 297 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 EPB41L1Q9H4G0 881 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 CYP4F12Q9HCS2 524 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 PLK2Q9NYY3 685 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 SUCOQ9UBS9 1254 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 SLC2A6Q9UGQ3 507 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 RIMS3Q9UJD0 308 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 NEU3Q9UQ49 428 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 TBC1D30Q9Y2I9 924 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 FIS1Q9Y3D6 152 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 AP4B1Q9Y6B7 739 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 COL4A4P53420 1690 aaPredicted RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 PTPRDP23468 1912 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 DOCK3Q8IZD9 2030 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 TCAF2A6NFQ2 919 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 KCNU1A8MYU2 1149 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 E9PAM4 449 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 TNPO2O14787 897 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 MSI1O43347 362 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 DNAJA2O60884 412 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 MOCS2O96007 188 aaPredicted RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 CYP11A1P05108 521 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 RPLP2P05387 115 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 CTSHP09668 335 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 FAM58BPP0C7Q3 252 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 CCDC166P0CW27 439 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 HSPA8P11142 646 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 SLC2A3P11169 496 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 TCN1P20061 433 aaPredicted RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 YY1P25490 414 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 HOXC8P31273 242 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 MSX2P35548 267 aaPredicted RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 GRIK1P39086 918 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 RGS2P41220 211 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 CHRNA4P43681 627 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 LEPRP48357 1165 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 SERPINH1P50454 418 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 WNT3AP56704 352 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 STX1BP61266 288 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 PFKPQ01813 784 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 SULT2A1Q06520 285 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 TRIM25Q14258 630 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 TECRLQ5HYJ1 363 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 TSTD2Q5T7W7 516 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 MANEALQ5VSG8 457 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 CST9Q5W186 159 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 RGMBQ6NW40 437 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 CNSTQ6PJW8 725 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 RANBP10Q6VN20 620 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 LIAT1Q6ZQX7 453 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 GK5Q6ZS86 529 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 GALNT7Q86SF2 657 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 MFSD6LQ8IWD5 586 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 AHI1Q8N157 1196 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 SCAMP5Q8TAC9 235 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 PBXIP1Q96AQ6 731 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 EME1Q96AY2 570 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 DTNBP1Q96EV8 351 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 MRGPRX2Q96LB1 330 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 CNBD2Q96M20 576 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 UROC1Q96N76 676 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms