RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 USP29Q9HBJ7 922 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 ETNK2Q9NVF9 386 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 SPASTQ9UBP0 616 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 RALYQ9UKM9 306 aaKnown RBP13.92□□□□□ -0.18
PCNX4-209ENST00000555569 CLCA2Q9UQC9 943 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 RAXQ9Y2V3 346 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 RP1P56715 2156 aa13.92□□□□□ -0.18
PCNX4-209ENST00000555569 LY6G6EA0A0G2JKS1 128 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 MYO1FO00160 1098 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 MUSKO15146 869 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 LZTS3O60299 673 aaPredicted RBP13.91□□□□□ -0.18
PCNX4-209ENST00000555569 PRKCGP05129 697 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 TPM3P06753 285 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 MYF5P13349 255 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 CASP14P31944 242 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 EIF4A3P38919 411 aaKnown RBP13.91□□□□□ -0.18
PCNX4-209ENST00000555569 LIG3P49916 1009 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 SCNN1BP51168 640 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 AP1S1P61966 158 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 SEMG2Q02383 582 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 SLC25A11Q02978 314 aaKnown RBP13.91□□□□□ -0.18
PCNX4-209ENST00000555569 LBRQ14739 615 aaKnown RBP13.91□□□□□ -0.18
PCNX4-209ENST00000555569 WSCD2Q2TBF2 565 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 ZCCHC8Q6NZY4 707 aaKnown RBP13.91□□□□□ -0.18
PCNX4-209ENST00000555569 RBFAQ8N0V3 343 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 PAF1Q8N7H5 531 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 ECHDC3Q96DC8 303 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 TBATAQ96M53 351 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 PSKH2Q96QS6 385 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 XPO4Q9C0E2 1151 aaKnown RBP13.91□□□□□ -0.18
PCNX4-209ENST00000555569 TCEAL2Q9H3H9 227 aaPredicted RBP13.91□□□□□ -0.18
PCNX4-209ENST00000555569 PCDH18Q9HCL0 1135 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 APOBEC3BQ9UH17 382 aaKnown RBP13.91□□□□□ -0.18
PCNX4-209ENST00000555569 LHX6Q9UPM6 363 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 GPSM3Q9Y4H4 160 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.91□□□□□ -0.18
PCNX4-209ENST00000555569 U3KQA8 63 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 LRP4O75096 1905 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 ZFHX4Q86UP3 3567 aa13.91□□□□□ -0.18
PCNX4-209ENST00000555569 CFAP69A5D8W1 941 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 TMEM110-MUSTN1A8MSY1 372 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 TPP1O14773 563 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 MT-CO3P00414 261 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 SERPINB6P35237 376 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 SSR1P43307 286 aaKnown RBP13.9□□□□□ -0.18
PCNX4-209ENST00000555569 PEX5P50542 639 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 POLR2LP62875 67 aaKnown RBP13.9□□□□□ -0.18
PCNX4-209ENST00000555569 PPARDQ03181 441 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 SLC10A7Q0GE19 358 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 KRT81Q14533 505 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 ZNF235Q14590 738 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 AGERQ15109 404 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 HADHQ16836 314 aaKnown RBP13.9□□□□□ -0.18
PCNX4-209ENST00000555569 SKOR2Q2VWA4 1001 aaPredicted RBP13.9□□□□□ -0.18
PCNX4-209ENST00000555569 DEFB133Q30KQ1 61 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 PRRT3Q5FWE3 981 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 FAXCQ5TGI0 409 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 DCBLD1Q8N8Z6 715 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 ZNF564Q8TBZ8 553 aaPredicted RBP13.9□□□□□ -0.18
PCNX4-209ENST00000555569 NSMCE3Q96MG7 304 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 IL12RB2Q99665 862 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 SLC13A1Q9BZW2 595 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 NRSN2Q9GZP1 204 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 NCKIPSDQ9NZQ3 722 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 SALL4Q9UJQ4 1053 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 PNMA8BQ9ULN7 279 aaPredicted RBP13.9□□□□□ -0.18
PCNX4-209ENST00000555569 NENFQ9UMX5 172 aa13.9□□□□□ -0.18
PCNX4-209ENST00000555569 CACNA1GO43497 2377 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.89□□□□□ -0.19
PCNX4-209ENST00000555569 TRAFD1O14545 582 aaPredicted RBP13.89□□□□□ -0.19
PCNX4-209ENST00000555569 OPA1O60313 960 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 MAFKO60675 156 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 GCATO75600 419 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 PEX11BO96011 259 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 PCCBP05166 539 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 GP1BAP07359 652 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 HNRNPH3P31942 346 aaKnown RBP13.89□□□□□ -0.19
PCNX4-209ENST00000555569 HSPA9P38646 679 aaKnown RBP13.89□□□□□ -0.19
PCNX4-209ENST00000555569 ADKP55263 362 aaKnown RBP13.89□□□□□ -0.19
PCNX4-209ENST00000555569 CDH6P55285 790 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 RALGDSQ12967 914 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 MTM1Q13496 603 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 C1orf61Q13536 156 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 INPP5AQ14642 412 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 RTP5Q14D33 572 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 C19orf48Q6RUI8 117 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 LIPIQ6XZB0 460 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 BBS5Q8N3I7 341 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 ATPAF2Q8N5M1 289 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 IFI44Q8TCB0 444 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 NSMCE1Q8WV22 266 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 APOOQ9BUR5 198 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 LRRC61Q9BV99 259 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 RCOR3Q9P2K3 495 aaPredicted RBP13.89□□□□□ -0.19
PCNX4-209ENST00000555569 AK5Q9Y6K8 562 aa13.89□□□□□ -0.19
PCNX4-209ENST00000555569 TTC24A2A3L6 582 aaPredicted RBP13.88□□□□□ -0.19
PCNX4-209ENST00000555569 CPED1A4D0V7 1026 aa13.88□□□□□ -0.19
PCNX4-209ENST00000555569 LMO7DNF2Z398 122 aa13.88□□□□□ -0.19
PCNX4-209ENST00000555569 CBFA2T2O43439 604 aa13.88□□□□□ -0.19
PCNX4-209ENST00000555569 HTRA2O43464 458 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms