RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	DNTT	P04053	509 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	ADRB2	P07550	413 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	MMP3	P08254	477 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	MYZAP	P0CAP1	466 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	CTSA	P10619	480 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	SRD5A1	P18405	259 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	ITGAX	P20702	1163 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	ATP5F1	P24539	256 aa	Predicted RBP	4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	CERS1	P27544	350 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	EPHB2	P29323	1055 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	TNFSF8	P32971	234 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	EIF2D	P41214	584 aa	Known RBP	4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	CXCR3	P49682	368 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	CLCN5	P51795	746 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	CALD1	Q05682	793 aa	Known RBP	4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	DRAP1	Q14919	205 aa	Predicted RBP	4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	SHB	Q15464	509 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	TCTN1	Q2MV58	587 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	COL28A1	Q2UY09	1125 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	CEP78	Q5JTW2	689 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	PIK3CD-AS1	Q5SR53	167 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	KIAA1614	Q5VZ46	1190 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	PRPF39	Q86UA1	669 aa	Known RBP	4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	SRRM1	Q8IYB3	904 aa	Known RBP	4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	HORMAD2	Q8N7B1	307 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	SGCD	Q92629	289 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	JAKMIP2	Q96AA8	810 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	ARHGEF26	Q96DR7	871 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	ZNF333	Q96JL9	665 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	SIGLEC11	Q96RL6	698 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	YME1L1	Q96TA2	773 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	CDT1	Q9H211	546 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	PDZD7	Q9H5P4	517 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	MVB12B	Q9H7P6	319 aa		4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	CNOT8	Q9UFF9	292 aa	Known RBP	4.54	□□□□□ -1.68
KTN1-222	ENST00000555506	LSM4	Q9Y4Z0	139 aa	Known RBP	4.54	□□□□□ -1.68
KTN1-222	ENST00000555506		A0A0U1RQF3	1178 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	FAM237A	A0A1B0GTK4	181 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	FAM90A8P	A6NJQ4	464 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	HCRTR2	O43614	444 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	ATP2C2	O75185	946 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	NDUFS3	O75489	264 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	RB1	P06400	928 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	FAM90A13P	P0C7W8	464 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	FAM90A24P	P0C7X0	464 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	GABRB1	P18505	474 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	IL11	P20809	199 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	SMTNL2	Q2TAL5	461 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	FAM133B	Q5BKY9	247 aa	Known RBP	4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	JADE1	Q6IE81	842 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	KRTAP5-4	Q6L8H1	288 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	CES5A	Q6NT32	575 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	HMBOX1	Q6NT76	420 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	SLC30A6	Q6NXT4	461 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	LCTL	Q6UWM7	567 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	ZNF793	Q6ZN11	406 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	DEF8	Q6ZN54	512 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	DENND6A	Q8IWF6	608 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	KDM1B	Q8NB78	822 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	DDB2	Q92466	427 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	SNAPC3	Q92966	411 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	CCDC34	Q96HJ3	373 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	TMEM68	Q96MH6	324 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	NCAPG	Q9BPX3	1015 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	B3GNT4	Q9C0J1	378 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	TKTL2	Q9H0I9	626 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	BPIFA1	Q9NP55	256 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	NDRG3	Q9UGV2	375 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	A3GALT2	U3KPV4	340 aa		4.53	□□□□□ -1.68
KTN1-222	ENST00000555506	PPP6C	O00743	305 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	TP73	O15350	636 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	SLC25A12	O75746	678 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	NKX2-2	O95096	273 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	ETFA	P13804	333 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	ENO3	P13929	434 aa	Predicted RBP	4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	ZNF182	P17025	639 aa	Predicted RBP	4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	AGA	P20933	346 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	SHMT1	P34896	483 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	ID2	Q02363	134 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	CAPS	Q13938	189 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	ASTE1	Q2TB18	679 aa	Predicted RBP	4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	ZSCAN23	Q3MJ62	389 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	ESCO2	Q56NI9	601 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	C6orf10	Q5SRN2	563 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	PRAMEF19	Q5SWL8	479 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	GPR139	Q6DWJ6	353 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	NOXA1	Q86UR1	476 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	FAM217A	Q8IXS0	508 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	TEX11	Q8IYF3	940 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	SLC44A5	Q8NCS7	719 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	FBXL8	Q96CD0	374 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	TEX12	Q9BXU0	123 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	TXLNGY	Q9BZA5	131 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	SEMA4C	Q9C0C4	833 aa		4.52	□□□□□ -1.69
KTN1-222	ENST00000555506	LHPP	Q9H008	270 aa		4.52	□□□□□ -1.69

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