RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 SLC20A2Q08357 652 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 ARHGEF7Q14155 803 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 STX1AQ16623 288 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 MAP9Q49MG5 647 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 ZNF805Q5CZA5 627 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 LRRC73Q5JTD7 316 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 CDKAL1Q5VV42 579 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 HIST2H2BCQ6DN03 193 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 DPY19L2P1Q6NXN4 242 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 ENPP7Q6UWV6 458 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 IL22RA1Q8N6P7 574 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 C9orf43Q8TAL5 461 aaPredicted RBP13.38□□□□□ -0.27
TUBB3-207ENST00000554927 EPS8L1Q8TE68 723 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 EPAS1Q99814 870 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 NLRC4Q9NPP4 1024 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 TUBD1Q9UJT1 453 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 PLAAQ9Y263 795 aa13.38□□□□□ -0.27
TUBB3-207ENST00000554927 ILVBLA1L0T0 632 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 CLEC18AA5D8T8 446 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 ANKRD62A6NC57 917 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 TOR1BO14657 336 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 MBD3O95983 291 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 UGT2B4P06133 528 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 CCDC172P0C7W6 258 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 DESP17661 470 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 SDC4P31431 198 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 FLT3P36888 993 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 NSFP46459 744 aaKnown RBP13.37□□□□□ -0.27
TUBB3-207ENST00000554927 NOMO3P69849 1222 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 IRF4Q15306 451 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 ALG11Q2TAA5 492 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 KLHL40Q2TBA0 621 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 C2CD6Q53TS8 623 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 CLEC18BQ6UXF7 455 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 ZNF783Q6ZMS7 281 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 TTC7BQ86TV6 843 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 CLEC18CQ8NCF0 446 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 CFAP57Q96MR6 1250 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 KLHL32Q96NJ5 620 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 WRAP53Q9BUR4 548 aaKnown RBP13.37□□□□□ -0.27
TUBB3-207ENST00000554927 ZYG11BQ9C0D3 744 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 NAT10Q9H0A0 1025 aaKnown RBP13.37□□□□□ -0.27
TUBB3-207ENST00000554927 GANQ9H2C0 597 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 SEMA6CQ9H3T2 930 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 KLQ9UEF7 1012 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 ACTL7AQ9Y615 435 aa13.37□□□□□ -0.27
TUBB3-207ENST00000554927 FAM170AA1A519 330 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 ENO4A6NNW6 628 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 TMEM110-MUSTN1A8MSY1 372 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 ZMPSTE24O75844 475 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 CCL4P13236 92 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 GLB1P16278 677 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 TFE3P19532 575 aaPredicted RBP13.36□□□□□ -0.27
TUBB3-207ENST00000554927 MMP8P22894 467 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 ETFBP38117 255 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 COPB1P53618 953 aaKnown RBP13.36□□□□□ -0.27
TUBB3-207ENST00000554927 SRP54P61011 504 aaKnown RBP13.36□□□□□ -0.27
TUBB3-207ENST00000554927 ARF5P84085 180 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 ATP11AP98196 1134 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 UBXN1Q04323 297 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 POLD3Q15054 466 aaPredicted RBP13.36□□□□□ -0.27
TUBB3-207ENST00000554927 AMZ1Q400G9 498 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 SPRED1Q7Z699 444 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 TAF8Q7Z7C8 310 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 ATCAYQ86WG3 371 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 FAM131BQ86XD5 332 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 ZNF683Q8IZ20 524 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 TP53I13Q8NBR0 393 aaPredicted RBP13.36□□□□□ -0.27
TUBB3-207ENST00000554927 ANLNQ9NQW6 1124 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 METTL5Q9NRN9 209 aaKnown RBP13.36□□□□□ -0.27
TUBB3-207ENST00000554927 SEPT11Q9NVA2 429 aaKnown RBP13.36□□□□□ -0.27
TUBB3-207ENST00000554927 LRIT1Q9P2V4 623 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 TMEM59LQ9UK28 342 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 NOCTQ9UK39 431 aaKnown RBP13.36□□□□□ -0.27
TUBB3-207ENST00000554927 APPL1Q9UKG1 709 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 BSNQ9UPA5 3926 aa13.36□□□□□ -0.27
TUBB3-207ENST00000554927 ZFC3H1O60293 1989 aaKnown RBP13.36□□□□□ -0.27
TUBB3-207ENST00000554927 B4DGG1 531 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-207ENST00000554927 TNFP01375 233 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 CYP1A1P04798 512 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-207ENST00000554927 CALB1P05937 261 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 KRT3P12035 628 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 LIFP15018 202 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 XPAP23025 273 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-207ENST00000554927 PEX5P50542 639 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 GNA12Q03113 381 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 C16orf72Q14CZ0 275 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 LRRC14Q15048 493 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 CERCAMQ5T4B2 595 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 OTUD1Q5VV17 481 aaPredicted RBP13.35□□□□□ -0.27
TUBB3-207ENST00000554927 RWDD4Q6NW29 188 aaKnown RBP13.35□□□□□ -0.27
TUBB3-207ENST00000554927 RBM43Q6ZSC3 357 aaKnown RBP13.35□□□□□ -0.27
TUBB3-207ENST00000554927 TMPRSS9Q7Z410 1059 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 SLITRK4Q8IW52 837 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 DRC7Q8IY82 874 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 FAM46DQ8NEK8 389 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 GPR156Q8NFN8 814 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 ATL2Q8NHH9 583 aa13.35□□□□□ -0.27
TUBB3-207ENST00000554927 SLC30A5Q8TAD4 765 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms