RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 DXOO77932 396 aaKnown RBP10.7□□□□□ -0.7
SHMT2-215ENST00000554656 MTA2O94776 668 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 GP1BAP07359 652 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 MYBL1P10243 752 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 ALPPL2P10696 532 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 JUNDP17535 347 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 TGM2P21980 687 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 ACTN2P35609 894 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 ETFBP38117 255 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 GABREP78334 506 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 PDE1CQ14123 709 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-215ENST00000554656 CDKN3Q16667 212 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 CLEC16AQ2KHT3 1053 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 MYLK3Q32MK0 819 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 PERM1Q5SV97 790 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 ACAD10Q6JQN1 1059 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 ZCCHC8Q6NZY4 707 aaKnown RBP10.7□□□□□ -0.7
SHMT2-215ENST00000554656 LRRC69Q6ZNQ3 347 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 MON1BQ7L1V2 547 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 SYCE1Q8N0S2 351 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 RYBPQ8N488 228 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-215ENST00000554656 DENND6BQ8NEG7 585 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 ASB12Q8WXK4 309 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 ZNF592Q92610 1267 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 NTAN1Q96AB6 310 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 RAB7BQ96AH8 199 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 CENPTQ96BT3 561 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 NAF1Q96HR8 494 aaKnown RBP10.7□□□□□ -0.7
SHMT2-215ENST00000554656 KLHL32Q96NJ5 620 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 DEPDC7Q96QD5 511 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 MBNL1Q9NR56 388 aaKnown RBP10.7□□□□□ -0.7
SHMT2-215ENST00000554656 TRIM10Q9UDY6 481 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 CSNK1G3Q9Y6M4 447 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 ZNF462Q96JM2 2506 aa10.7□□□□□ -0.7
SHMT2-215ENST00000554656 SETXQ7Z333 2677 aaKnown RBP10.69□□□□□ -0.7
SHMT2-215ENST00000554656 MACROD2A1Z1Q3 448 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 NEMP2A6NFY4 417 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 KDELR3O43731 214 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 USP12O75317 370 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 POP4O95707 220 aaKnown RBP10.69□□□□□ -0.7
SHMT2-215ENST00000554656 FTLP02792 175 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-215ENST00000554656 CELA2BP08218 269 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-215ENST00000554656 TIMP2P16035 220 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 GPD1P21695 349 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 PDX1P52945 283 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 GEMIN4P57678 1058 aaKnown RBP10.69□□□□□ -0.7
SHMT2-215ENST00000554656 SNRPD1P62314 119 aaKnown RBP10.69□□□□□ -0.7
SHMT2-215ENST00000554656 SGCGQ13326 291 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 C1orf61Q13536 156 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 POLD3Q15054 466 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-215ENST00000554656 ISXQ2M1V0 245 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 ARL13BQ3SXY8 428 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 PAPD7Q5XG87 772 aaKnown RBP10.69□□□□□ -0.7
SHMT2-215ENST00000554656 CRTC1Q6UUV9 634 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 EFL1Q7Z2Z2 1120 aaKnown RBP10.69□□□□□ -0.7
SHMT2-215ENST00000554656 PHF13Q86YI8 300 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-215ENST00000554656 SLC35F3Q8IY50 421 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 RTL3Q8N8U3 475 aaKnown RBP10.69□□□□□ -0.7
SHMT2-215ENST00000554656 TP53I13Q8NBR0 393 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-215ENST00000554656 C3orf20Q8ND61 904 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 MAPK15Q8TD08 544 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 LMX1AQ8TE12 382 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 SLC39A7Q92504 469 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 HMCESQ96FZ2 354 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 PRR11Q96HE9 360 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-215ENST00000554656 LRRC61Q9BV99 259 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 DUSP23Q9BVJ7 150 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 BOCQ9BWV1 1114 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 PACSIN1Q9BY11 444 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 CLPBQ9H078 707 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 RETREG1Q9H6L5 497 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 USP29Q9HBJ7 922 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 SEPT11Q9NVA2 429 aaKnown RBP10.69□□□□□ -0.7
SHMT2-215ENST00000554656 UVRAGQ9P2Y5 699 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 LHX3Q9UBR4 397 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 COQ6Q9Y2Z9 468 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 DUSP10Q9Y6W6 482 aa10.69□□□□□ -0.7
SHMT2-215ENST00000554656 COL6A6A6NMZ7 2263 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 CPED1A4D0V7 1026 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 EME2A4GXA9 379 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-215ENST00000554656 H3BM21 787 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 NEMP1O14524 444 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 FANCGO15287 622 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 BUB1O43683 1085 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 MMP20O60882 483 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 PIGNO95427 931 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 KRT3P12035 628 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 LSSP48449 732 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 DUSP3P51452 185 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-215ENST00000554656 RPL7AP62424 266 aaKnown RBP10.68□□□□□ -0.7
SHMT2-215ENST00000554656 TUBB4BP68371 445 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 OGDHQ02218 1023 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 SERINC3Q13530 473 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 IRF4Q15306 451 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 PRRT3Q5FWE3 981 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 PPP1R15BQ5SWA1 713 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 KCTD16Q68DU8 428 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 GDPD4Q6W3E5 623 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 SLFN11Q7Z7L1 901 aa10.68□□□□□ -0.7
SHMT2-215ENST00000554656 PHACTR4Q8IZ21 702 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms