RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 GTF2A2P52657 109 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 RAB10P61026 200 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 AP2B1P63010 937 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 MS4A2Q01362 244 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 CDH17Q12864 832 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 DYNC1I2Q13409 638 aaKnown RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SETDB1Q15047 1291 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 LRRC14Q15048 493 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 BTBD8Q5XKL5 378 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 OVOS1Q6IE37 1185 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 TIGD7Q6NT04 549 aaPredicted RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 FAM117BQ6P1L5 589 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 GPR142Q7Z601 462 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SLC22A9Q8IVM8 553 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 TERB1Q8NA31 727 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 TXNDC5Q8NBS9 432 aaKnown RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 ARMC2Q8NEN0 867 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 OR8J3Q8NGG0 315 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 DDI1Q8WTU0 396 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 BRI3BPQ8WY22 251 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 DGCR14Q96DF8 476 aaKnown RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 NRBF2Q96F24 287 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 NUDCD1Q96RS6 583 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 FDXACB1Q9BRP7 624 aaPredicted RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 LRRC3Q9BY71 257 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 TRIM4Q9C037 500 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 EBF3Q9H4W6 596 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 NPHS2Q9NP85 383 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 PICK1Q9NRD5 415 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SEPT11Q9NVA2 429 aaKnown RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 AAR2Q9Y312 384 aaKnown RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 UGT2A1Q9Y4X1 527 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SNX13Q9Y5W8 968 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SLC30A1Q9Y6M5 507 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 WASH3PC4AMC7 463 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 M0QYV0 167 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 COPEO14579 308 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SYN3O14994 580 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 HTRA2O43464 458 aaPredicted RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 TRIM13O60858 407 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 AVILO75366 819 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 POLBP06746 335 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 PDGFRAP16234 1089 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 GABRB1P18505 474 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 CDH2P19022 906 aaPredicted RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 CA4P22748 312 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 HRH2P25021 359 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 LMO2P25791 158 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 HOXD9P28356 352 aaPredicted RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 RGS2P41220 211 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 RPS6KA3P51812 740 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 HERVK_113P63132 956 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 ASPHQ12797 758 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SERINC3Q13530 473 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 DGKDQ16760 1214 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 LSM12Q3MHD2 195 aaKnown RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 TTLL9Q3SXZ7 439 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 FAM133BQ5BKY9 247 aaKnown RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 N4BP2L1Q5TBK1 243 aaPredicted RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 TAF2Q6P1X5 1199 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 GDPD4Q6W3E5 623 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF354CQ86Y25 554 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 LACC1Q8IV20 430 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 PHTF2Q8N3S3 785 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF781Q8N8C0 355 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 KCTD6Q8NC69 237 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 GAB3Q8WWW8 586 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 LPGAT1Q92604 370 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 KIAA1191Q96A73 305 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 NMD3Q96D46 503 aaKnown RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 YIPF6Q96EC8 236 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 KCNK16Q96T55 309 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SH3GL3Q99963 347 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SELENOSQ9BQE4 189 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 TINF2Q9BSI4 451 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 COLEC11Q9BWP8 271 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 OSBPL11Q9BXB4 747 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 ERVK-6Q9BXR3 956 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 GABARAPL3Q9BY60 117 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 TRIM6Q9C030 488 aaPredicted RBP3.47□□□□□ -1.85
SEC23A-207ENST00000554615 SIAEQ9HAT2 523 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 PDGFCQ9NRA1 345 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 GKN1Q9NS71 199 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 ZDHHC2Q9UIJ5 367 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 STAP1Q9ULZ2 295 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 CHMP2BQ9UQN3 213 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF510Q9Y2H8 683 aa3.47□□□□□ -1.85
SEC23A-207ENST00000554615 WDR27A2RRH5 827 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 SLC35F4A4IF30 521 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 ANKRD65E5RJM6 399 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 PI4K2BG5E9Z4 385 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 KERAO60938 352 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 SPAG7O75391 227 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 ERN1O75460 977 aaKnown RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF821O75541 412 aaPredicted RBP3.46□□□□□ -1.86
SEC23A-207ENST00000554615 CRTAMO95727 393 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 NTRK1P04629 796 aa3.46□□□□□ -1.86
SEC23A-207ENST00000554615 GPIP06744 558 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms