RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 CD6P30203 668 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 NTSR1P30989 418 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 EIF2S3P41091 472 aaKnown RBP5.13□□□□□ -1.59
ATXN3-228ENST00000554592 PNPLA4P41247 253 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 MAGEA11P43364 429 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 SLC6A9P48067 706 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 ZXDBP98169 803 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 MYL7Q01449 175 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 DSC2Q02487 901 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 FOXL1Q12952 345 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 SMAD1Q15797 465 aaKnown RBP5.13□□□□□ -1.59
ATXN3-228ENST00000554592 MST1LQ2TV78 715 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 HLA-BQ31612 363 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 CFAP221Q4G0U5 840 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 OVCH2Q7RTZ1 564 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 TMPRSS12Q86WS5 348 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 MARCH9Q86YJ5 346 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 SPATA2LQ8IUW3 424 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-228ENST00000554592 SFTPA1Q8IWL2 248 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 SCN4BQ8IWT1 228 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 PALM2Q8IXS6 379 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 C4orf32Q8N8J7 132 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 PLA2G15Q8NCC3 412 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 STKLD1Q8NE28 680 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 ENGASEQ8NFI3 743 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 CADM4Q8NFZ8 388 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 OR14K1Q8NGZ2 314 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 IPO4Q8TEX9 1081 aaKnown RBP5.13□□□□□ -1.59
ATXN3-228ENST00000554592 OTUB2Q96DC9 234 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 C1GALT1C1Q96EU7 318 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 SPATA17Q96L03 361 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 CEP295NLQ96MC4 621 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 MSTO1Q9BUK6 570 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 GAREM1Q9H706 876 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 ZDHHC4Q9NPG8 344 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 TM7SF3Q9NS93 570 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 ING3Q9NXR8 418 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 DDX43Q9NXZ2 648 aaKnown RBP5.13□□□□□ -1.59
ATXN3-228ENST00000554592 EHD2Q9NZN4 543 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 KCND2Q9NZV8 630 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 LARSQ9P2J5 1176 aaKnown RBP5.13□□□□□ -1.59
ATXN3-228ENST00000554592 DEC1Q9P2X7 70 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 GTF3C4Q9UKN8 822 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 SIK3Q9Y2K2 1263 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 TCAF1Q9Y4C2 921 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 PCDHB1Q9Y5F3 818 aa5.13□□□□□ -1.59
ATXN3-228ENST00000554592 ASCC3Q8N3C0 2202 aaKnown RBP5.13□□□□□ -1.59
ATXN3-228ENST00000554592 URB1O60287 2271 aaKnown RBP5.13□□□□□ -1.59
ATXN3-228ENST00000554592 SMG1Q96Q15 3661 aaKnown RBP5.13□□□□□ -1.59
ATXN3-228ENST00000554592 SETXQ7Z333 2677 aaKnown RBP5.12□□□□□ -1.59
ATXN3-228ENST00000554592 FAM149AA5PLN7 773 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 FAM171A2A8MVW0 826 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 HNRNPDLO14979 420 aaKnown RBP5.12□□□□□ -1.59
ATXN3-228ENST00000554592 MUSKO15146 869 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 BCAT2O15382 392 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-228ENST00000554592 PHF2O75151 1096 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 TULP3O75386 442 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 OLFM2O95897 454 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 PIGRP01833 764 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 CDK4P11802 303 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 JUPP14923 745 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 COMTP21964 271 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 PCSK1P29120 753 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 OXTRP30559 389 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 ABCD1P33897 745 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 MATKP42679 507 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 KIR2DL3P43628 341 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 TRAPPC10P48553 1259 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 LHX1P48742 406 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 KDSRQ06136 332 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 ANKRD1Q15327 319 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 SPDYAQ5MJ70 313 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 LY6G5CQ5SRR4 150 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 C10orf76Q5T2E6 689 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 KRTAP5-3Q6L8H2 238 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 FAM171BQ6P995 826 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 FAM180AQ6UWF9 173 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 VSTM1Q6UX27 236 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 C4orf50Q6ZRC1 276 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 DENND5BQ6ZUT9 1274 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 CHST15Q7LFX5 561 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-228ENST00000554592 Q8N1X5 172 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 TMEM86AQ8N2M4 240 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 PDCL2Q8N4E4 241 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 LILRA3Q8N6C8 439 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-228ENST00000554592 SYT2Q8N9I0 419 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-228ENST00000554592 GCDHQ92947 438 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-228ENST00000554592 WBP1Q96G27 269 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 ZNF560Q96MR9 790 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 PKMYT1Q99640 499 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 C7orf25Q9BPX7 421 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 FOXP1Q9H334 677 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-228ENST00000554592 CLMPQ9H6B4 373 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 IL21RQ9HBE5 538 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 ITM2CQ9NQX7 267 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 CFAP97Q9P2B7 532 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 CPQQ9Y646 472 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 CFAP20Q9Y6A4 193 aaKnown RBP5.12□□□□□ -1.59
ATXN3-228ENST00000554592 WDR81Q562E7 1941 aa5.12□□□□□ -1.59
ATXN3-228ENST00000554592 DSPP15924 2871 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms