RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 CPPED1Q9BRF8 314 aaPredicted RBP4.93□□□□□ -1.62
PPP4R3A-204ENST00000554574 MESP1Q9BRJ9 268 aa4.93□□□□□ -1.62
PPP4R3A-204ENST00000554574 PI4K2AQ9BTU6 479 aa4.93□□□□□ -1.62
PPP4R3A-204ENST00000554574 ARGLU1Q9NWB6 273 aaPredicted RBP4.93□□□□□ -1.62
PPP4R3A-204ENST00000554574 ETAA1Q9NY74 926 aa4.93□□□□□ -1.62
PPP4R3A-204ENST00000554574 VSX1Q9NZR4 365 aaPredicted RBP4.93□□□□□ -1.62
PPP4R3A-204ENST00000554574 FLRT1Q9NZU1 646 aa4.93□□□□□ -1.62
PPP4R3A-204ENST00000554574 FBXO9Q9UK97 447 aaPredicted RBP4.93□□□□□ -1.62
PPP4R3A-204ENST00000554574 CNTN6Q9UQ52 1028 aa4.93□□□□□ -1.62
PPP4R3A-204ENST00000554574 CDYLQ9Y232 598 aa4.93□□□□□ -1.62
PPP4R3A-204ENST00000554574 PCDHB2Q9Y5E7 798 aa4.93□□□□□ -1.62
PPP4R3A-204ENST00000554574 NRCAMQ92823 1304 aa4.93□□□□□ -1.62
PPP4R3A-204ENST00000554574 TDRD15B5MCY1 1934 aaKnown RBP4.93□□□□□ -1.62
PPP4R3A-204ENST00000554574 CCDC151A5D8V7 595 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 TCAF2A6NFQ2 919 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 PRR5-ARHGAP8B1AHC4 643 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 RFXAPO00287 272 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 TNPO2O14787 897 aaKnown RBP4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 ZNF185O15231 689 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 CA12O43570 354 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 TRIM13O60858 407 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 VTNP04004 478 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 CLTAP09496 248 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 MCF2P10911 925 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 CKMT1AP12532 417 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 PECAM1P16284 738 aaPredicted RBP4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 CHRM3P20309 590 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 PTDSS1P48651 473 aaKnown RBP4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 CHN2P52757 468 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 PNLIPRP1P54315 467 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 CRHR2Q13324 411 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 CUL2Q13617 745 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 KCNAB1Q14722 419 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 TAF12Q16514 161 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 MAPKAPK3Q16644 382 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 NFRKBQ6P4R8 1299 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 MZT2AQ6P582 158 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 MOGAT3Q86VF5 341 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 ZNF280BQ86YH2 543 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 LINC01356Q8N9X3 169 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 NOA1Q8NC60 698 aaKnown RBP4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 KAT2BQ92831 832 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 USP13Q92995 863 aaPredicted RBP4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 EID2BQ96D98 161 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 KRTAP4-12Q9BQ66 201 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 THAP2Q9H0W7 228 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 CDT1Q9H211 546 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 PDCL3Q9H2J4 239 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 ANKZF1Q9H8Y5 726 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 CD320Q9NPF0 282 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 XPNPEP3Q9NQH7 507 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 SEPT11Q9NVA2 429 aaKnown RBP4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 TAS2R14Q9NYV8 317 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 RAB21Q9UL25 225 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 CRYL1Q9Y2S2 319 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 HTTP42858 3142 aa4.92□□□□□ -1.62
PPP4R3A-204ENST00000554574 A0A1B0GUA9 196 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 SMIM35A0A1B0GVV1 85 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 TARSL2A2RTX5 802 aaKnown RBP4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 DRGXA6NNA5 263 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 TMCO5BA8MYB1 307 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 J3KRW8 73 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 HAS3O00219 553 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 RRP9O43818 475 aaKnown RBP4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 MTA2O94776 668 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 ERLIN2O94905 339 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 INMTO95050 263 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 FTCDO95954 541 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 TNNC2P02585 160 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 FAM163BP0C2L3 166 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 SMIM10L2AP0DMW4 78 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 SMIM10L2BP0DMW5 78 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 KRT5P13647 590 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 ARF4P18085 180 aaPredicted RBP4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 CR2P20023 1033 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 CYP2B6P20813 491 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 ACO1P21399 889 aaKnown RBP4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 ATICP31939 592 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 CXCR5P32302 372 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 PAFAH1B1P43034 410 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 GPC5P78333 572 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 ADAM17P78536 824 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 FOXD4Q12950 439 aaPredicted RBP4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 RPS6KA1Q15418 735 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 CCL14Q16627 93 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 SGSM1Q2NKQ1 1148 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 ZIK1Q3SY52 487 aaPredicted RBP4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 CFAP221Q4G0U5 840 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 PRAMEF19Q5SWL8 479 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 PCGF5Q86SE9 256 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 NT5DC3Q86UY8 548 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 DNAAF5Q86Y56 855 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 THNSL1Q8IYQ7 743 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 CFAP52Q8N1V2 620 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 NAXEQ8NCW5 288 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 PPHLN1Q8NEY8 458 aaKnown RBP4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 OR52N2Q8NGI0 321 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 CAGE1Q8TC20 777 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 TAF4BQ92750 862 aa4.91□□□□□ -1.62
PPP4R3A-204ENST00000554574 SKA1Q96BD8 255 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms