RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 LAPTM5Q13571 262 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 MFSD13AQ14CX5 517 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 ZNF484Q5JVG2 852 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 LETMD1Q6P1Q0 360 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 TMEM65Q6PI78 240 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 FIP1L1Q6UN15 594 aaKnown RBP9.61□□□□□ -0.87
SIX4-202ENST00000554079 KCTD1Q719H9 257 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 HORMAD1Q86X24 394 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 UNC45BQ8IWX7 931 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 IFNL2Q8IZJ0 200 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 CPA6Q8N4T0 437 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 PCDH20Q8N6Y1 951 aaKnown RBP9.61□□□□□ -0.87
SIX4-202ENST00000554079 TMC2Q8TDI7 906 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 STON2Q8WXE9 905 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 NXPE3Q969Y0 559 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 DACT3Q96B18 629 aaPredicted RBP9.61□□□□□ -0.87
SIX4-202ENST00000554079 NXNL1Q96CM4 212 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 APBA2Q99767 749 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 DGCR6LQ9BY27 220 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 WDR55Q9H6Y2 383 aaPredicted RBP9.61□□□□□ -0.87
SIX4-202ENST00000554079 ANKHQ9HCJ1 492 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 ZFP14Q9HCL3 533 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 TM9SF3Q9HD45 589 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 SYBUQ9NX95 663 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 GLTPQ9NZD2 209 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 GMEB2Q9UKD1 530 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 BAG5Q9UL15 447 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 NAALAD2Q9Y3Q0 740 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 AUP1Q9Y679 476 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 RGPD3A6NKT7 1758 aaPredicted RBP9.61□□□□□ -0.87
SIX4-202ENST00000554079 RGPD4Q7Z3J3 1758 aa9.61□□□□□ -0.87
SIX4-202ENST00000554079 RNF103-CHMP3A0A140T963 221 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 H0YAE9 185 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 LINC01387J3KSC0 135 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 INMTO95050 263 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 PDGFAP04085 211 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 TRAPPC2P0DI81 140 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 TRAPPC2BP0DI82 140 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 PSKH1P11801 424 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 IL7P13232 177 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 CYP3A5P20815 502 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 PCMT1P22061 227 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 MMP8P22894 467 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 GTF2E2P29084 291 aaKnown RBP9.6□□□□□ -0.87
SIX4-202ENST00000554079 ALDH4A1P30038 563 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 KRT20P35900 424 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 UGT2B10P36537 528 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 NPTX2P47972 431 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 SOX9P48436 509 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 NT5C2P49902 561 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 MFAP3P55082 362 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 GABARAPL2P60520 117 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 CETN1Q12798 172 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 AP3B2Q13367 1082 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 DDR2Q16832 855 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 PARP15Q460N3 678 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 TFDP3Q5H9I0 405 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 ARHGEF16Q5VV41 709 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 STYK1Q6J9G0 422 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 STRADAQ7RTN6 431 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 R3HCC1LQ7Z5L2 792 aaKnown RBP9.6□□□□□ -0.87
SIX4-202ENST00000554079 THNSL1Q8IYQ7 743 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 LRRC47Q8N1G4 583 aaKnown RBP9.6□□□□□ -0.87
SIX4-202ENST00000554079 CPA5Q8WXQ8 436 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 SEPT1Q8WYJ6 367 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 HDAC2Q92769 488 aaKnown RBP9.6□□□□□ -0.87
SIX4-202ENST00000554079 COA7Q96BR5 231 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 SLC45A3Q96JT2 553 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 UBXN10Q96LJ8 280 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 ZNF300Q96RE9 604 aaPredicted RBP9.6□□□□□ -0.87
SIX4-202ENST00000554079 TEX13BQ9BXU2 312 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 ZC3H12CQ9C0D7 883 aaKnown RBP9.6□□□□□ -0.87
SIX4-202ENST00000554079 EPS8L2Q9H6S3 715 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 QTRT2Q9H974 415 aaKnown RBP9.6□□□□□ -0.87
SIX4-202ENST00000554079 GPRC5CQ9NQ84 441 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 GGA3Q9NZ52 723 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 CPNE7Q9UBL6 633 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 CPSF3Q9UKF6 684 aaKnown RBP9.6□□□□□ -0.87
SIX4-202ENST00000554079 NUDT5Q9UKK9 219 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.6□□□□□ -0.87
SIX4-202ENST00000554079 A8MUA0 341 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 NEMP1O14524 444 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 ZBTB39O15060 712 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 PMM2O15305 246 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 CAPN5O15484 640 aaPredicted RBP9.6□□□□□ -0.87
SIX4-202ENST00000554079 PRKD3O94806 890 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 RBP1P09455 135 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 ABCG1P45844 678 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 RPS9P46781 194 aaKnown RBP9.6□□□□□ -0.87
SIX4-202ENST00000554079 VAMP7P51809 220 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 TAP1Q03518 808 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 GPR50Q13585 617 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 TBRG1Q3YBR2 411 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 COLEC12Q5KU26 742 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 TBCELQ5QJ74 424 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 GRTP1Q5TC63 336 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 TMEM198Q66K66 360 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 PM20D1Q6GTS8 502 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 NAPRTQ6XQN6 538 aa9.6□□□□□ -0.87
SIX4-202ENST00000554079 ZNF767PQ75MW2 155 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms