RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 GRSF1Q12849 480 aaKnown RBP eCLIP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 MYO1EQ12965 1108 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 PDIA5Q14554 519 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 ZNF268Q14587 947 aaPredicted RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 PPP2R5AQ15172 486 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 DHCR24Q15392 516 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 SEPT7Q16181 437 aaKnown RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 SOWAHAQ2M3V2 549 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 PITRM1Q5JRX3 1037 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 ATXN7L2Q5T6C5 722 aaPredicted RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 EGFLAMQ63HQ2 1017 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 B3GNTL1Q67FW5 361 aaPredicted RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 CNNM4Q6P4Q7 775 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 FAM171BQ6P995 826 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 CCNI2Q6ZMN8 369 aaPredicted RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 Q6ZNX1 250 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 PAQR9Q6ZVX9 377 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 HAUS6Q7Z4H7 955 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 ELMOD1Q8N336 334 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 MINDY1Q8N5J2 469 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 LEMD2Q8NC56 503 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 APPL2Q8NEU8 664 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 ZMIZ2Q8NF64 920 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 FBXO18Q8NFZ0 1043 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 OR5B17Q8NGF7 314 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 ZNF480Q8WV37 535 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 ADAMTS14Q8WXS8 1223 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 HPS3Q969F9 1004 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 FUBP1Q96AE4 644 aaKnown RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 SAAL1Q96ER3 474 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 MRFAP1L1Q96HT8 127 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 IFT74Q96LB3 600 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 NAP1L4Q99733 375 aaKnown RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 TCHPQ9BT92 498 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 ALOXE3Q9BYJ1 711 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 SEMA4CQ9C0C4 833 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 CCSER1Q9C0I3 900 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 KCTD10Q9H3F6 313 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 DPEP3Q9H4B8 488 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 PLEKHA5Q9HAU0 1116 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 KIAA1586Q9HCI6 787 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 OSER1Q9NX31 292 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 DUS2Q9NX74 493 aaKnown RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 DPP3Q9NY33 737 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 FOXJ2Q9P0K8 574 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 HSFX1Q9UBD0 423 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 LRWD1Q9UFC0 647 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 KCNG1Q9UIX4 513 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 MAFFQ9ULX9 164 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 CLEC4EQ9ULY5 219 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 BTBD3Q9Y2F9 522 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 ASB3Q9Y575 518 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 RAI2Q9Y5P3 530 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 RAD54BQ9Y620 910 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 STYXL1Q9Y6J8 313 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 COL5A1P20908 1838 aaPredicted RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 COL27A1Q8IZC6 1860 aaPredicted RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 TCRBV21S2A2A0A5A6 115 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 GOLGA8IPA6NC78 632 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 GOLGA8JA6NMD2 632 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 MDM4O15151 490 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 CASC3O15234 703 aaKnown RBP3.34□□□□□ -1.87
SLIRP-202ENST00000553981 RHOBTB1O94844 696 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 OAS1P00973 400 aaKnown RBP3.34□□□□□ -1.87
SLIRP-202ENST00000553981 CISD3P0C7P0 127 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 ATXN1LP0C7T5 689 aaKnown RBP3.34□□□□□ -1.87
SLIRP-202ENST00000553981 FTH1P19P0C7X4 201 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 ITGB6P18564 788 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 BDNFP23560 247 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 TUFMP49411 452 aaKnown RBP3.34□□□□□ -1.87
SLIRP-202ENST00000553981 TAF6P49848 677 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 KRTAP10-9P60411 292 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 GTF2BQ00403 316 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 OCA2Q04671 838 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 KDSRQ06136 332 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 ZNF33AQ06730 810 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 DHX8Q14562 1220 aaKnown RBP3.34□□□□□ -1.87
SLIRP-202ENST00000553981 KARSQ15046 597 aaKnown RBP3.34□□□□□ -1.87
SLIRP-202ENST00000553981 TCEA2Q15560 299 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 ZRSR1Q15695 479 aaKnown RBP3.34□□□□□ -1.87
SLIRP-202ENST00000553981 SPDYE7PQ495Y7 208 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 CT83Q5H943 113 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 BROXQ5VW32 411 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 DAB2IPQ5VWQ8 1189 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 LAYNQ6UX15 382 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 TTC30AQ86WT1 665 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 TMEM25Q86YD3 366 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 BBS7Q8IWZ6 715 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 SRRM1Q8IYB3 904 aaKnown RBP3.34□□□□□ -1.87
SLIRP-202ENST00000553981 ADGRF2Q8IZF7 708 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 TSTD1Q8NFU3 115 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 SPPL2BQ8TCT7 592 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 MYLPFQ96A32 169 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 DNAJC19Q96DA6 116 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 LRIG1Q96JA1 1093 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 CCDC43Q96MW1 224 aaKnown RBP3.34□□□□□ -1.87
SLIRP-202ENST00000553981 ZSWIM1Q9BR11 485 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 MRPL45Q9BRJ2 306 aaKnown RBP3.34□□□□□ -1.87
SLIRP-202ENST00000553981 CBWD1Q9BRT8 395 aa3.34□□□□□ -1.87
SLIRP-202ENST00000553981 GTPBP2Q9BX10 602 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms