RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ETNK1Q9HBU6 452 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 DNAAF2Q9NVR5 837 aaKnown RBP14.65□□□□□ -0.06
SHMT2-208ENST00000553868 RBM22Q9NW64 420 aaKnown RBP eCLIP14.65□□□□□ -0.061e-9■■■■□ 20
SHMT2-208ENST00000553868 DUS2Q9NX74 493 aaKnown RBP14.65□□□□□ -0.06
SHMT2-208ENST00000553868 MARK1Q9P0L2 795 aa14.65□□□□□ -0.06
SHMT2-208ENST00000553868 UBA2Q9UBT2 640 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-208ENST00000553868 APOBEC2Q9Y235 224 aaKnown RBP14.65□□□□□ -0.06
SHMT2-208ENST00000553868 MUC22E2RYF6 1773 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-208ENST00000553868 CXorf51AA0A1B0GTR3 108 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 EIF3HO15372 352 aaKnown RBP eCLIP14.64□□□□□ -0.07
SHMT2-208ENST00000553868 ZBTB24O43167 697 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-208ENST00000553868 ATP8B1O43520 1251 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 PPFIA2O75334 1257 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 GJB3O75712 270 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 ANXA9O76027 345 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 METTL18O95568 372 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 PENKP01210 267 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-208ENST00000553868 APRTP07741 180 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 HSPA9P38646 679 aaKnown RBP14.64□□□□□ -0.07
SHMT2-208ENST00000553868 MMP13P45452 471 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 DHX9Q08211 1270 aaKnown RBP14.64□□□□□ -0.07
SHMT2-208ENST00000553868 ZBTB17Q13105 803 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 ZNF235Q14590 738 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 KCNJ11Q14654 390 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 LBRQ14739 615 aaKnown RBP14.64□□□□□ -0.07
SHMT2-208ENST00000553868 CRY1Q16526 586 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 HIF1AQ16665 826 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 MAP7D1Q3KQU3 841 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 SPDYCQ5MJ68 293 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 FYB2Q5VWT5 728 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 CENPUQ71F23 418 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 METTL3Q86U44 580 aaKnown RBP14.64□□□□□ -0.07
SHMT2-208ENST00000553868 PDIK1LQ8N165 341 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 MREGQ8N565 214 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 TAB3Q8N5C8 712 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-208ENST00000553868 TEX26Q8N6G2 289 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 DCAF4L2Q8NA75 395 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 MCUQ8NE86 351 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 ATP2A3Q93084 1043 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 FCRL3Q96P31 734 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-208ENST00000553868 ACBD3Q9H3P7 528 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 ECT2Q9H8V3 914 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 SEPT3Q9UH03 358 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 VPS28Q9UK41 221 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 AAR2Q9Y312 384 aaKnown RBP14.64□□□□□ -0.07
SHMT2-208ENST00000553868 WNT6Q9Y6F9 365 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 DOCK4Q8N1I0 1966 aa14.64□□□□□ -0.07
SHMT2-208ENST00000553868 A0A0D9SEW6 157 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 NEDD8-MDP1E9PL57 170 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 J3KR12 359 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 K7EQS6 105 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 AP3B1O00203 1094 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 CBX4O00257 560 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 FAM153BP0C7A2 387 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 NFKB1P19838 968 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 PSMB4P28070 264 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 CSKP41240 450 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 PLK1P53350 603 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 GEMP55040 296 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 GAD2Q05329 585 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 CAMK2BQ13554 666 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 KCTD19Q17RG1 926 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-208ENST00000553868 FAM153CQ494X1 144 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 DNAJC21Q5F1R6 531 aaKnown RBP14.63□□□□□ -0.07
SHMT2-208ENST00000553868 LY6G5CQ5SRR4 150 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 RETSATQ6NUM9 610 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 TMC3Q7Z5M5 1100 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 CCDC25Q86WR0 208 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 TMEM25Q86YD3 366 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 SFTPA1Q8IWL2 248 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 ADGRG2Q8IZP9 1017 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 BHMTQ93088 406 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 SPACA7Q96KW9 195 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 XPO6Q96QU8 1125 aaKnown RBP14.63□□□□□ -0.07
SHMT2-208ENST00000553868 FCRL5Q96RD9 977 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 FEM1AQ9BSK4 669 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 CEP41Q9BYV8 373 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 PDFQ9HBH1 243 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 GLOD4Q9HC38 313 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 XAB2Q9HCS7 855 aaKnown RBP14.63□□□□□ -0.07
SHMT2-208ENST00000553868 ZDHHC4Q9NPG8 344 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 FAM153AQ9UHL3 310 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 MMP17Q9ULZ9 603 aa14.63□□□□□ -0.07
SHMT2-208ENST00000553868 COL6A6A6NMZ7 2263 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 GOLGA8CPA6NN73 597 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 TP73O15350 636 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 HOXC11O43248 304 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-208ENST00000553868 CACNG3O60359 315 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 CBFA2T3O75081 653 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 PEX11BO96011 259 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 MLNP12872 115 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 TYRP14679 529 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 CES1P23141 567 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 PMS2P54278 862 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 KCNC4Q03721 635 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 SLC20A2Q08357 652 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 NR1H3Q13133 447 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 DHCR24Q15392 516 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 CFAP58Q5T655 872 aa14.62□□□□□ -0.07
SHMT2-208ENST00000553868 FAXCQ5TGI0 409 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms