RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 TNFSF14O43557 240 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 LZTS3O60299 673 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-204ENST00000553324 ZRANB2O95218 330 aaKnown RBP eCLIP15.44■□□□□ 0.06
SHMT2-204ENST00000553324 TNNT1P13805 278 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 EPHA8P29322 1005 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-204ENST00000553324 LIG3P49916 1009 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 NAP1L1P55209 391 aaKnown RBP15.44■□□□□ 0.06
SHMT2-204ENST00000553324 FAM193AP78312 1265 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 IL9RQ01113 521 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 SLC10A2Q12908 348 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-204ENST00000553324 LRRC14Q15048 493 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 AGERQ15109 404 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 SHBQ15464 509 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 HS1BP3Q53T59 392 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 LRRC73Q5JTD7 316 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 ARMC12Q5T9G4 340 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 PTAR1Q7Z6K3 402 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-204ENST00000553324 DAAM2Q86T65 1068 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 RFX6Q8HWS3 928 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 CCDC13Q8IYE1 715 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 RCOR2Q8IZ40 523 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 PGBD5Q8N414 524 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 PLD5Q8N7P1 536 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 RNF25Q96BH1 459 aaPredicted RBP15.44■□□□□ 0.06
SHMT2-204ENST00000553324 WRAP53Q9BUR4 548 aaKnown RBP15.44■□□□□ 0.06
SHMT2-204ENST00000553324 PCDHGC4Q9Y5F7 938 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 HEY1Q9Y5J3 304 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 ADAMTS9Q9P2N4 1935 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 PCNX2A6NKB5 2137 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 SPTY2D1-AS1A0A0U1RR47 76 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 NEMP2A6NFY4 417 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 RAD51BO15315 384 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 C6P13671 934 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 ITIH2P19823 946 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 CA4P22748 312 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 MMP12P39900 470 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 PEX5P50542 639 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 PFN3P60673 137 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 MAXP61244 160 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 HNRNPKP61978 463 aaKnown RBP eCLIP15.43■□□□□ 0.06
SHMT2-204ENST00000553324 PPIDQ08752 370 aaKnown RBP15.43■□□□□ 0.06
SHMT2-204ENST00000553324 ALG1LQ6GMV1 187 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 ZSWIM9Q86XI8 627 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 KATNAL2Q8IYT4 538 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 TPCN2Q8NHX9 752 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 BAHD1Q8TBE0 780 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-204ENST00000553324 PDCD6IPQ8WUM4 868 aaKnown RBP15.43■□□□□ 0.06
SHMT2-204ENST00000553324 RBM41Q96IZ5 413 aaKnown RBP15.43■□□□□ 0.06
SHMT2-204ENST00000553324 SEMA3CQ99985 751 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 GPR27Q9NS67 375 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 HYOU1Q9Y4L1 999 aa15.43■□□□□ 0.06
SHMT2-204ENST00000553324 H3BM21 787 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 PJA2O43164 708 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 PGLSO95336 258 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 MAP3K6O95382 1288 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 ELFN1P0C7U0 828 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 CYP2A6P11509 494 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-204ENST00000553324 CDK4P11802 303 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 VAV2P52735 878 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 THOP1P52888 689 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 GSDMDP57764 484 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 KIF5AQ12840 1032 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 BNIP3Q12983 259 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 PDE1CQ14123 709 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-204ENST00000553324 TAZQ16635 292 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 TFDP3Q5H9I0 405 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 MFSD7Q6UXD7 560 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 RAD9BQ6WBX8 426 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 DPPA4Q7L190 304 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 KIAA1328Q86T90 577 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 PARGQ86W56 976 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 GATAD2AQ86YP4 633 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 SLC22A18ASQ8N1D0 253 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 TP53I13Q8NBR0 393 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-204ENST00000553324 SPC24Q8NBT2 197 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 EXD1Q8NHP7 514 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 KIAA1524Q8TCG1 905 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 BTN2A2Q8WVV5 523 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 SCRN2Q96FV2 425 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 FTSJ1Q9UET6 329 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 BTBD3Q9Y2F9 522 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 PPIL1Q9Y3C6 166 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 RAI2Q9Y5P3 530 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 SPTBN2O15020 2390 aa15.42■□□□□ 0.06
SHMT2-204ENST00000553324 TTC24A2A3L6 582 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-204ENST00000553324 LDOC1O95751 146 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-204ENST00000553324 CPP00450 1065 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 JCHAINP01591 159 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 CSF2P04141 144 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 ALPPL2P10696 532 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 TGM2P21980 687 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 HTR1BP28222 390 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 CETN2P41208 172 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 CDKN2BP42772 138 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 COPS2P61201 443 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 AP1B1Q10567 949 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 FOXC1Q12948 553 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 LIPIQ6XZB0 460 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 USP45Q70EL2 814 aa15.41■□□□□ 0.06
SHMT2-204ENST00000553324 ATL2Q8NHH9 583 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms