RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 ITGA7Q13683 1181 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 MAP9Q49MG5 647 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 LCE1AQ5T7P2 110 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 WDR93Q6P2C0 686 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 DZIP1Q86YF9 867 aaKnown RBP5.32□□□□□ -1.56
ATXN3-218ENST00000553309 NME8Q8N427 588 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 WDR60Q8WVS4 1066 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 ITFG2Q969R8 447 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 FAR2Q96K12 515 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 RPGRIP1Q96KN7 1286 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 MYCBPQ99417 103 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-218ENST00000553309 WACQ9BTA9 647 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 ABHD14AQ9BUJ0 271 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 RPAP3Q9H6T3 665 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-218ENST00000553309 DNAJC18Q9H819 358 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 NRBP1Q9UHY1 535 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 CD207Q9UJ71 328 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 ASH1LQ9NR48 2969 aaKnown RBP5.32□□□□□ -1.56
ATXN3-218ENST00000553309 SIP14410 1827 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 OTOGLQ3ZCN5 2332 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 MYH2Q9UKX2 1941 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 MYH13Q9UKX3 1938 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 MROH5Q6ZUA9 1318 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 TRBV5-3A0A0A0MS03 114 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 GXYLT2A0PJZ3 443 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 CD8B2A6NJW9 211 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 HMGB1P1B2RPK0 211 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-218ENST00000553309 LOC730098B7Z3J9 87 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 ZNF814B7Z6K7 855 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 CTAGE5O15320 804 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 INSIG1O15503 277 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 KIF1CO43896 1103 aaKnown RBP5.31□□□□□ -1.56
ATXN3-218ENST00000553309 DUSP11O75319 330 aaKnown RBP5.31□□□□□ -1.56
ATXN3-218ENST00000553309 CRYABP02511 175 aaKnown RBP5.31□□□□□ -1.56
ATXN3-218ENST00000553309 CCDC172P0C7W6 258 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 NEFHP12036 1026 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 ITGB6P18564 788 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 SP100P23497 879 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-218ENST00000553309 FOXG1P55316 489 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-218ENST00000553309 RHBDL3P58872 404 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 BTKQ06187 659 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 MAPK7Q13164 816 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 MIDNQ504T8 468 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 ANKRD40Q6AI12 368 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 RINT1Q6NUQ1 792 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 CTR9Q6PD62 1173 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 CCDC146Q8IYE0 955 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 ACER1Q8TDN7 264 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 PRPF18Q99633 342 aaKnown RBP5.31□□□□□ -1.56
ATXN3-218ENST00000553309 ELAC2Q9BQ52 826 aaKnown RBP5.31□□□□□ -1.56
ATXN3-218ENST00000553309 ERVK-5Q9HDB9 667 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 KCNK9Q9NPC2 374 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 NLRC4Q9NPP4 1024 aa5.31□□□□□ -1.56
ATXN3-218ENST00000553309 SEMA4BQ9NPR2 832 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-218ENST00000553309 TET1Q8NFU7 2136 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 SIPA1L1O43166 1804 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 IGLV5-39A0A0G2JS06 123 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 M0QYT0 321 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 NKX2-8O15522 239 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 DNPH1O43598 174 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 TLX3O43711 291 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-218ENST00000553309 SNAI1O95863 264 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-218ENST00000553309 GH2P01242 217 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 IFIT1P09914 478 aaKnown RBP5.3□□□□□ -1.56
ATXN3-218ENST00000553309 NPPBP16860 134 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 TECP42680 631 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 ALDH18A1P54886 795 aaKnown RBP5.3□□□□□ -1.56
ATXN3-218ENST00000553309 SLC37A1P57057 533 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 LINC00205P59089 165 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 HYAL1Q12794 435 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 GPM6BQ13491 265 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 ANGPT1Q15389 498 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 TCTN1Q2MV58 587 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 ZNF569Q5MCW4 686 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 GORABQ5T7V8 394 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 CCDC30Q5VVM6 783 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 ZNF474Q6S9Z5 364 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-218ENST00000553309 TRABD2AQ86V40 505 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 LURAP1LQ8IV03 231 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 NRSN1Q8IZ57 195 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 FAM47BQ8NA70 645 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 SNRNP27Q8WVK2 155 aaKnown RBP5.3□□□□□ -1.56
ATXN3-218ENST00000553309 C12orf42Q96LP6 360 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 ZNF347Q96SE7 839 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 PIMREGQ9BSJ6 248 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 CCDC94Q9BW85 323 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-218ENST00000553309 UPF3AQ9H1J1 476 aaKnown RBP5.3□□□□□ -1.56
ATXN3-218ENST00000553309 EBF3Q9H4W6 596 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 ARFGAP3Q9NP61 516 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 MSRB1Q9NZV6 116 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 HERC5Q9UII4 1024 aaKnown RBP5.3□□□□□ -1.56
ATXN3-218ENST00000553309 UTS2RQ9UKP6 389 aa5.3□□□□□ -1.56
ATXN3-218ENST00000553309 AGO2Q9UKV8 859 aaKnown RBP5.3□□□□□ -1.56
ATXN3-218ENST00000553309 MROH7-TTC4A0A0A0MT08 1334 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 ASTN1O14525 1302 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 CDK5RAP2Q96SN8 1893 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 LOC105369274A0A096LPK9 316 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 LOC102723532A0A0G2JNH3 316 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 CCER2I3L3R5 266 aa5.29□□□□□ -1.56
ATXN3-218ENST00000553309 KCNAB3O43448 404 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms