RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 C6P13671 934 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 JUPP14923 745 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 MMP12P39900 470 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 LIG3P49916 1009 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 PEX5P50542 639 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 DAB2P98082 770 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 E2F1Q01094 437 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 CAMK2BQ13554 666 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 ASTE1Q2TB18 679 aaPredicted RBP13.05□□□□□ -0.32
ACTN1-207ENST00000553290 TPRG1LQ5T0D9 272 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 ZSWIM9Q86XI8 627 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 PROSER1Q86XN7 944 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 MAP7D3Q8IWC1 876 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 PDCD7Q8N8D1 485 aaKnown RBP13.05□□□□□ -0.32
ACTN1-207ENST00000553290 FAM181AQ8N9Y4 354 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 ZNF548Q8NEK5 533 aaPredicted RBP13.05□□□□□ -0.32
ACTN1-207ENST00000553290 USP29Q9HBJ7 922 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 MBNL1Q9NR56 388 aaKnown RBP13.05□□□□□ -0.32
ACTN1-207ENST00000553290 DKK4Q9UBT3 224 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 COQ6Q9Y2Z9 468 aa13.05□□□□□ -0.32
ACTN1-207ENST00000553290 FAM149AA5PLN7 773 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 TRABD2BA6NFA1 517 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 SRRM3A6NNA2 597 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-207ENST00000553290 K7ESM1 405 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 TRAFD1O14545 582 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-207ENST00000553290 AQP9O43315 295 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 LZTS3O60299 673 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-207ENST00000553290 PEX11BO96011 259 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 KRT7P08729 469 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 TMEM253P0C7T8 217 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 CKMT1AP12532 417 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 IL4RP24394 825 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 DUSP3P51452 185 aaPredicted RBP13.04□□□□□ -0.32
ACTN1-207ENST00000553290 ARSEP51690 589 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 EIF2B5Q13144 721 aaKnown RBP13.04□□□□□ -0.32
ACTN1-207ENST00000553290 MMRN1Q13201 1228 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 PDK2Q15119 407 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 IRF4Q15306 451 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 WSCD2Q2TBF2 565 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 RALGPS1Q5JS13 557 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 MARC1Q5VT66 337 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 MACC1Q6ZN28 852 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 CACTIN-AS1Q8N1I8 211 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 KCTD6Q8NC69 237 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 SPOCK2Q92563 424 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 APOLD1Q96LR9 279 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 TBATAQ96M53 351 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 NUDCD1Q96RS6 583 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 PACSIN1Q9BY11 444 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 ABHD10Q9NUJ1 306 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 NCKIPSDQ9NZQ3 722 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 SPASTQ9UBP0 616 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 KLF15Q9UIH9 416 aa13.04□□□□□ -0.32
ACTN1-207ENST00000553290 SHROOM3Q8TF72 1996 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 CFAP47Q6ZTR5 3102 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 TPP1O14773 563 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 HTRA2O43464 458 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-207ENST00000553290 MFAP3LO75121 409 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 SOCS5O75159 536 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 NEBLO76041 1014 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 CD48P09326 243 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 ELFN1P0C7U0 828 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 CR2P20023 1033 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 NFKBIAP25963 317 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 HTR1BP28222 390 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 MAN1A1P33908 653 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 GJC1P36383 396 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 MMP13P45452 471 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 BLKP51451 505 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 DPYSL3Q14195 570 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 PAFAH1B3Q15102 231 aaKnown RBP13.03□□□□□ -0.32
ACTN1-207ENST00000553290 ANKRD20A8PQ5CZ79 823 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 HES3Q5TGS1 186 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 ZCCHC8Q6NZY4 707 aaKnown RBP13.03□□□□□ -0.32
ACTN1-207ENST00000553290 LIPIQ6XZB0 460 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 KDM7AQ6ZMT4 941 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 DPPA4Q7L190 304 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 MARCH9Q86YJ5 346 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 PHACTR4Q8IZ21 702 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 RNF214Q8ND24 703 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 ATL2Q8NHH9 583 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 MDM1Q8TC05 714 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 LMX1AQ8TE12 382 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 RFFLQ8WZ73 363 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 CCDC42Q96M95 316 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 IL12RB2Q99665 862 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 MGME1Q9BQP7 344 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 ZNF670Q9BS34 389 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 SLC13A1Q9BZW2 595 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 SCUBE2Q9NQ36 999 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 APOBEC3BQ9UH17 382 aaKnown RBP13.03□□□□□ -0.32
ACTN1-207ENST00000553290 SALL4Q9UJQ4 1053 aa13.03□□□□□ -0.32
ACTN1-207ENST00000553290 TAF4O00268 1085 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 PRKCGP05129 697 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 GP1BAP07359 652 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 GARSP41250 739 aaKnown RBP13.02□□□□□ -0.33
ACTN1-207ENST00000553290 ADKP55263 362 aaKnown RBP13.02□□□□□ -0.33
ACTN1-207ENST00000553290 TAS2R40P59535 323 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 SEMG2Q02383 582 aa13.02□□□□□ -0.33
ACTN1-207ENST00000553290 PPARDQ03181 441 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms