RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 C6orf10Q5SRN2 563 aa11.65□□□□□ -0.54
PPFIA2-227ENST00000552948 CCDC81Q6ZN84 652 aa11.65□□□□□ -0.54
PPFIA2-227ENST00000552948 ZC3H7AQ8IWR0 971 aaKnown RBP11.65□□□□□ -0.54
PPFIA2-227ENST00000552948 SPPL2BQ8TCT7 592 aa11.65□□□□□ -0.54
PPFIA2-227ENST00000552948 EMID1Q96A84 441 aaPredicted RBP11.65□□□□□ -0.54
PPFIA2-227ENST00000552948 PABPC5Q96DU9 382 aaKnown RBP11.65□□□□□ -0.54
PPFIA2-227ENST00000552948 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
PPFIA2-227ENST00000552948 TBL1YQ9BQ87 522 aa11.65□□□□□ -0.54
PPFIA2-227ENST00000552948 SPATC1LQ9H0A9 340 aa11.65□□□□□ -0.54
PPFIA2-227ENST00000552948 CXCL16Q9H2A7 254 aa11.65□□□□□ -0.54
PPFIA2-227ENST00000552948 NUDT5Q9UKK9 219 aa11.65□□□□□ -0.54
PPFIA2-227ENST00000552948 PTGDR2Q9Y5Y4 395 aa11.65□□□□□ -0.54
PPFIA2-227ENST00000552948 CSADQ9Y600 493 aa11.65□□□□□ -0.54
PPFIA2-227ENST00000552948 STRCQ7RTU9 1775 aa11.65□□□□□ -0.54
PPFIA2-227ENST00000552948 TTC36A6NLP5 189 aa11.65□□□□□ -0.55
PPFIA2-227ENST00000552948 FBP2O00757 339 aa11.65□□□□□ -0.55
PPFIA2-227ENST00000552948 SLC1A2P43004 574 aa11.65□□□□□ -0.55
PPFIA2-227ENST00000552948 PFKFB4Q16877 469 aa11.65□□□□□ -0.55
PPFIA2-227ENST00000552948 NOMO2Q5JPE7 1267 aa11.65□□□□□ -0.55
PPFIA2-227ENST00000552948 OSMRQ99650 979 aa11.65□□□□□ -0.55
PPFIA2-227ENST00000552948 SPC25Q9HBM1 224 aa11.65□□□□□ -0.55
PPFIA2-227ENST00000552948 UTP6Q9NYH9 597 aaKnown RBP11.65□□□□□ -0.55
PPFIA2-227ENST00000552948 XIRP1Q702N8 1843 aaKnown RBP11.65□□□□□ -0.55
PPFIA2-227ENST00000552948 H3BMM5 538 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 M0R3G1 203 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 B4GAT1O43505 415 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 TUBA4AP68366 448 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 RELAQ04206 551 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 POLD3Q15054 466 aaPredicted RBP11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 PKN3Q6P5Z2 889 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 ERMP1Q7Z2K6 904 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 CENPLQ8N0S6 344 aaPredicted RBP11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 LSMEM2Q8N112 164 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 MIER2Q8N344 545 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 TRPC4APQ8TEL6 797 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 CASP10Q92851 521 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 VPS33AQ96AX1 596 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 TRHDEQ9UKU6 1024 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 AAR2Q9Y312 384 aaKnown RBP11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 RECQL4O94761 1208 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 RBP1P09455 135 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 RXRGP48443 463 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 PPP1R8Q12972 351 aaKnown RBP11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 ZNF829Q3KNS6 432 aaPredicted RBP11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 CARM1Q86X55 608 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 AFG1LQ8WV93 481 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 LRCH3Q96II8 777 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 HSFY1Q96LI6 401 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 MLPHQ9BV36 600 aaPredicted RBP11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 GBA3Q9H227 469 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 SPON1Q9HCB6 807 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 SUPT3HB4E1H0 165 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 AURKAO14965 403 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 GABBR2O75899 941 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 LTA4HP09960 611 aaKnown RBP11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 CXCR3P49682 368 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 TAF6P49848 677 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 KPNA1P52294 538 aaPredicted RBP11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 GPR158Q5T848 1215 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 DCBLD1Q8N8Z6 715 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 SEPT8Q92599 483 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 NCLNQ969V3 563 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 PPP1R14BQ96C90 147 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 CCDC126Q96EE4 140 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 ZNF560Q96MR9 790 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 NXF3Q9H4D5 531 aaKnown RBP11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 SMPD3Q9NY59 655 aaPredicted RBP11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 IPO11Q9UI26 975 aaKnown RBP11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 ANAPC2Q9UJX6 822 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 BTAF1O14981 1849 aa11.64□□□□□ -0.55
PPFIA2-227ENST00000552948 FUOMA2VDF0 154 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 TMEM247A6NEH6 219 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 SLC22A2O15244 555 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 ANXA9O76027 345 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 SIX3O95343 332 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 SNAP29O95721 258 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 PIM1P11309 404 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 CYP2C9P11712 490 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 CYP2B6P20813 491 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 RPS9P46781 194 aaKnown RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 HK2P52789 917 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 RALGPS2Q86X27 583 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 CPSF7Q8N684 471 aaKnown RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 PTGR2Q8N8N7 351 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 C19orf60Q96EN9 201 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 CENPNQ96H22 339 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 TEPSINQ96N21 525 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 BIRC8Q96P09 236 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 C1orf50Q9BV19 199 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 RMI1Q9H9A7 625 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 SARS2Q9NP81 518 aaKnown RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 SEMA4BQ9NPR2 832 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 CASS4Q9NQ75 786 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 COL24A1Q17RW2 1714 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 A8MT66 165 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 H3BMQ9 156 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 PORP16435 677 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 KCNA5P22460 613 aa11.63□□□□□ -0.55
PPFIA2-227ENST00000552948 PROZP22891 400 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms