RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 PCDHGC4Q9Y5F7 938 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 SNX11Q9Y5W9 270 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 CAPN6Q9Y6Q1 641 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 DCHS1Q96JQ0 3298 aa18.62■□□□□ 0.57
PRPF40B-216ENST00000552301 ASCC3Q8N3C0 2202 aaKnown RBP18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 A0A1W2PR77 199 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 TLR4O00206 839 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 TRAFD1O14545 582 aaPredicted RBP18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 RIOK3O14730 519 aaKnown RBP18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 WNT9AO14904 365 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 MMP20O60882 483 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 PAK4O96013 591 aaPredicted RBP18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 WNT1P04628 370 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 PECAM1P16284 738 aaPredicted RBP18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 ITIH2P19823 946 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 CTSKP43235 329 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 BNC1Q01954 994 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 DSC2Q02487 901 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 TMEM52BQ4KMG9 183 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 ARMC12Q5T9G4 340 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 BBS12Q6ZW61 710 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 DGLUCYQ7Z3D6 616 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 ZSWIM9Q86XI8 627 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 NDUFAF2Q8N183 169 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 TMEM145Q8NBT3 493 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 DENND6BQ8NEG7 585 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 KLHDC7BQ96G42 594 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 ALS2CR12Q96Q35 445 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 C1QTNF2Q9BXJ5 285 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 OSBPL8Q9BZF1 889 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 DNAAF2Q9NVR5 837 aaKnown RBP18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 PCDHB9Q9Y5E1 797 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 RAI2Q9Y5P3 530 aa18.61■□□□□ 0.57
PRPF40B-216ENST00000552301 DCDC2BA2VCK2 349 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 A6NNZ2 444 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 MTSS1O43312 755 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 HTRA2O43464 458 aaPredicted RBP18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 LZTS3O60299 673 aaPredicted RBP18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 DFNA5O60443 496 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 PRKCGP05129 697 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 MMP12P39900 470 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 CCT8P50990 548 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 TRAF2Q12933 501 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 ZBTB17Q13105 803 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 ALG1LQ6GMV1 187 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 PTAR1Q7Z6K3 402 aaPredicted RBP18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 ZC3H18Q86VM9 953 aaKnown RBP18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 FAM174AQ8TBP5 190 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 ASB12Q8WXK4 309 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 ALG3Q92685 438 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 IL12RB2Q99665 862 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 FERMT1Q9BQL6 677 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 LZTFL1Q9NQ48 299 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 SAE1Q9UBE0 346 aaPredicted RBP18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 PACSIN2Q9UNF0 486 aaPredicted RBP18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 EFR3BQ9Y2G0 817 aa18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 FNDC3AQ9Y2H6 1198 aaKnown RBP18.6■□□□□ 0.57
PRPF40B-216ENST00000552301 GOLGA6L9A6NEM1 432 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 APOC4-APOC2K7ER74 178 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 FPGTO14772 594 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 TJP3O95049 919 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 PGLSO95336 258 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 APOC2P02655 101 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 THEGLP0DJG4 465 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 CYP2A6P11509 494 aaPredicted RBP18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 PTPN7P35236 360 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 PEX5P50542 639 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 EPHB1P54762 984 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 CLDN2P57739 230 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 NXPH1P58417 271 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 SLC14A1Q13336 389 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 FGL2Q14314 439 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 PRKD1Q15139 912 aaPredicted RBP18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 OXR1Q8N573 874 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 UBE2Q2Q8WVN8 375 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 AGAP3Q96P47 875 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 CEP41Q9BYV8 373 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 SLC32A1Q9H598 525 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 IL21RQ9HBE5 538 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 TM7SF3Q9NS93 570 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 PHTF1Q9UMS5 762 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 HS3ST3A1Q9Y663 406 aa18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 TP53BP1Q12888 1972 aaPredicted RBP18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 CNOT1A5YKK6 2376 aaKnown RBP18.59■□□□□ 0.57
PRPF40B-216ENST00000552301 CABIN1Q9Y6J0 2220 aa18.58■□□□□ 0.57
PRPF40B-216ENST00000552301 HACD1B0YJ81 288 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 H0Y8X5 98 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 H7C0C1 242 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 ELFN1P0C7U0 828 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 ZNF883P0CG24 379 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 C6P13671 934 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 ATP5OP48047 213 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 ARRB1P49407 418 aaPredicted RBP18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 LIG3P49916 1009 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 SEMG2Q02383 582 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 ADCY2Q08462 1091 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 SUZ12Q15022 739 aaKnown RBP18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 ZNF423Q2M1K9 1284 aa18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 KYAT3Q6YP21 454 aaKnown RBP18.58■□□□□ 0.56
PRPF40B-216ENST00000552301 GCNT7Q6ZNI0 430 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms