RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 NAA35Q5VZE5 725 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 FAM72DQ6L9T8 149 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 FAM72BQ86X60 149 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 GPR156Q8NFN8 814 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 RXFP2Q8WXD0 754 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 RBM15Q96T37 977 aaKnown RBP eCLIP14.31□□□□□ -0.121e-7■■■□□ 17.3
CHMP1A-210ENST00000551981 NDST4Q9H3R1 872 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 AKAP7Q9P0M2 348 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 NEU3Q9UQ49 428 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 COQ6Q9Y2Z9 468 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 OR1A2Q9Y585 309 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 DGKBQ9Y6T7 804 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 ANKRD36A6QL64 1941 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 A0A1W2PQC6 194 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 SUV39H1O43463 412 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 PCCBP05166 539 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 ITGB6P18564 788 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 ITIH1P19827 911 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 PTPN9P43378 593 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 MAPK10P53779 464 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 NFKB2Q00653 900 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 ZFP36L1Q07352 338 aaKnown RBP14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 SRSF6Q13247 344 aaKnown RBP14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 ARHGEF7Q14155 803 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 TBR1Q16650 682 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 UGP2Q16851 508 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 CCDC14Q49A88 953 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 VWA3BQ502W6 1294 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 ZNF574Q6ZN55 896 aaPredicted RBP14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 STRADAQ7RTN6 431 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 SPRED1Q7Z699 444 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 TAF8Q7Z7C8 310 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 NOP9Q86U38 636 aaKnown RBP14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 VASH2Q86V25 355 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 ZFAND4Q86XD8 727 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 DNAAF5Q86Y56 855 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 FAM46DQ8NEK8 389 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 HMCESQ96FZ2 354 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 PDXPQ96GD0 296 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 PCDH12Q9NPG4 1184 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 KIAA1468Q9P260 1216 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 DAAM1Q9Y4D1 1078 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 FHOD1Q9Y613 1164 aa14.3□□□□□ -0.12
CHMP1A-210ENST00000551981 TSPAN11A1L157 253 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 CACNB4O00305 520 aaPredicted RBP14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 PIGNO95427 931 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 MMEP08473 750 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 KELP23276 732 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 LIG3P49916 1009 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 YBEYP58557 167 aaPredicted RBP14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 AGERQ15109 404 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 PARP15Q460N3 678 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 C14orf28Q4W4Y0 310 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 RAB6CQ53S08 254 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 PHF19Q5T6S3 580 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 KLHDC7AQ5VTJ3 777 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 BRAT1Q6PJG6 821 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 OGFOD3Q6PK18 319 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 ZNF677Q86XU0 584 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 CCDC185Q8N715 623 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 RTL3Q8N8U3 475 aaKnown RBP14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 OR56A4Q8NGH8 313 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 EPS8L1Q8TE68 723 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 USP7Q93009 1102 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 NTAN1Q96AB6 310 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 ZNF641Q96N77 438 aaPredicted RBP14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 B3GNT4Q9C0J1 378 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 RAB6CQ9H0N0 254 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 SUV39H2Q9H5I1 410 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 FOXJ2Q9P0K8 574 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 LRIT1Q9P2V4 623 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 RNF215Q9Y6U7 377 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 LRRK2Q5S007 2527 aa14.29□□□□□ -0.12
CHMP1A-210ENST00000551981 C2CD4BA6NLJ0 364 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 B4DGG1 531 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 F8VZ95 297 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 AGRPO00253 132 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 PES1O00541 588 aaKnown RBP14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 INSIG1O15503 277 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 ZW10O43264 779 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 NUDT21O43809 227 aaKnown RBP14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 UCHL3P15374 230 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 MMP8P22894 467 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 EPHB2P29323 1055 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 MMP12P39900 470 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 KIAA1024LP59773 190 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 BECN1Q14457 450 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 MAP9Q49MG5 647 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 EFHC2Q5JST6 749 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 DPY19L2P1Q6NXN4 242 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 SLFN11Q7Z7L1 901 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 DTX1Q86Y01 620 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 SLITRK4Q8IW52 837 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 MLKLQ8NB16 471 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 NETO2Q8NC67 525 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 KIAA1524Q8TCG1 905 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 GPT2Q8TD30 523 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 FAM172AQ8WUF8 416 aa14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 CENPIQ92674 756 aaPredicted RBP14.28□□□□□ -0.12
CHMP1A-210ENST00000551981 EXOC2Q96KP1 924 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms