RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 GATA5Q9BWX5 397 aaPredicted RBP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 TDRD1Q9BXT4 1180 aaKnown RBP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 WWP1Q9H0M0 922 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 TASP1Q9H6P5 420 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 ARL8BQ9NVJ2 186 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.58□□□□□ -0.56
RAB5C-208ENST00000551338 HAO1Q9UJM8 370 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 TLK1Q9UKI8 766 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 SPO11Q9Y5K1 396 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 OR51B4Q9Y5P0 310 aa11.58□□□□□ -0.56
RAB5C-208ENST00000551338 A0A087X1B8 175 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.57□□□□□ -0.56
RAB5C-208ENST00000551338 ZBBXA8MT70 800 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 CBX4O00257 560 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 BUD23O43709 281 aaKnown RBP11.57□□□□□ -0.56
RAB5C-208ENST00000551338 TMCC1O94876 653 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 S1PR4O95977 384 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 C1RP00736 705 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 LRG1P02750 347 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 C8AP07357 584 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 PIRTP0C851 137 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 ALOX15P16050 662 aaPredicted RBP11.57□□□□□ -0.56
RAB5C-208ENST00000551338 CRABP2P29373 138 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 CSKP41240 450 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 GLRBP48167 497 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 AQP5P55064 265 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 PRAMEP78395 509 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 SLC7A9P82251 487 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 POU4F1Q01851 419 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 TRAF2Q12933 501 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 SEMA3AQ14563 771 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 TSNAXIP1Q2TAA8 658 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 PABPC1LQ4VXU2 614 aaKnown RBP11.57□□□□□ -0.56
RAB5C-208ENST00000551338 HECTD2Q5U5R9 776 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 MAVSQ7Z434 540 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 LDB1Q86U70 411 aaPredicted RBP11.57□□□□□ -0.56
RAB5C-208ENST00000551338 RNF135Q8IUD6 432 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 CILP2Q8IUL8 1156 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 FSTL5Q8N475 847 aaPredicted RBP11.57□□□□□ -0.56
RAB5C-208ENST00000551338 PNPLA1Q8N8W4 532 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 KLHL23Q8NBE8 558 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 GABPB2Q8TAK5 448 aaPredicted RBP11.57□□□□□ -0.56
RAB5C-208ENST00000551338 PIWIL2Q8TC59 973 aaKnown RBP11.57□□□□□ -0.56
RAB5C-208ENST00000551338 MRPS31Q92665 395 aaKnown RBP11.57□□□□□ -0.56
RAB5C-208ENST00000551338 UTP4Q969X6 686 aaKnown RBP11.57□□□□□ -0.56
RAB5C-208ENST00000551338 NXNL1Q96CM4 212 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 PTCD3Q96EY7 689 aaKnown RBP11.57□□□□□ -0.56
RAB5C-208ENST00000551338 SCYL1Q96KG9 808 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 TSNARE1Q96NA8 513 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 TMEM237Q96Q45 408 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 NDNQ99608 321 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 OMDQ99983 421 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 EBF4Q9BQW3 602 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 SIKE1Q9BRV8 207 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 MUC3BQ9H195 1237 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 SCUBE2Q9NQ36 999 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 IGSF5Q9NSI5 407 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 KLC4Q9NSK0 619 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 PNPOQ9NVS9 261 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 OXSMQ9NWU1 459 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 CPSF2Q9P2I0 782 aaKnown RBP11.57□□□□□ -0.56
RAB5C-208ENST00000551338 DNMT3BQ9UBC3 853 aaKnown RBP11.57□□□□□ -0.56
RAB5C-208ENST00000551338 XPR1Q9UBH6 696 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 STK39Q9UEW8 545 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 RUVBL2Q9Y230 463 aaKnown RBP11.57□□□□□ -0.56
RAB5C-208ENST00000551338 SSX2IPQ9Y2D8 614 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 ACOT9Q9Y305 439 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 ARL5AQ9Y689 179 aa11.57□□□□□ -0.56
RAB5C-208ENST00000551338 CCDC162PA2VCL2 907 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 H0Y626 953 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 TRAFD1O14545 582 aaPredicted RBP11.56□□□□□ -0.56
RAB5C-208ENST00000551338 ZNF195O14628 629 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 MGRN1O60291 552 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 TRIM13O60858 407 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 H2AFYO75367 372 aaKnown RBP11.56□□□□□ -0.56
RAB5C-208ENST00000551338 KLHL2O95198 593 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 GOT2P00505 430 aaKnown RBP11.56□□□□□ -0.56
RAB5C-208ENST00000551338 ATP5BP06576 529 aaKnown RBP11.56□□□□□ -0.56
RAB5C-208ENST00000551338 HDCP19113 662 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 OGNP20774 298 aaKnown RBP11.56□□□□□ -0.56
RAB5C-208ENST00000551338 PSMA3P25788 255 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 HNRNPH1P31943 449 aaKnown RBP11.56□□□□□ -0.56
RAB5C-208ENST00000551338 SCNN1BP51168 640 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 ZNF140P52738 457 aaPredicted RBP11.56□□□□□ -0.56
RAB5C-208ENST00000551338 PRKAA2P54646 552 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 ZBTB16Q05516 673 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 LAMB3Q13751 1172 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 KRT72Q14CN4 511 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 TECRLQ5HYJ1 363 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 NCEH1Q6PIU2 408 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 LINGO4Q6UY18 593 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 CCDC149Q6ZUS6 474 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 WDR75Q8IWA0 830 aaKnown RBP11.56□□□□□ -0.56
RAB5C-208ENST00000551338 CPXM2Q8N436 756 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 DCAF4L2Q8NA75 395 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 KREMEN2Q8NCW0 462 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 GPR150Q8NGU9 434 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 OR6P1Q8NGX9 317 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 BRSK1Q8TDC3 778 aa11.56□□□□□ -0.56
RAB5C-208ENST00000551338 SP7Q8TDD2 431 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms