RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 SPTLC1O15269 473 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 THRBP10828 461 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 ZNF7P17097 686 aaPredicted RBP15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 FEN1P39748 380 aaKnown RBP15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 PTPN20Q4JDL3 420 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 PYDC2Q56P42 97 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 MAP1SQ66K74 1059 aaPredicted RBP15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 PPP4R4Q6NUP7 873 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 NKAPQ8N5F7 415 aaKnown RBP15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 LRRC17Q8N6Y2 441 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 LPCAT1Q8NF37 534 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 FAXDC2Q96IV6 333 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 KRCC1Q9NPI7 259 aaPredicted RBP15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 OR12D3Q9UGF7 316 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 NID2Q14112 1375 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 MED1Q15648 1581 aaPredicted RBP15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 E7ENX8 843 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 NEK10Q6ZWH5 1172 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 HSPBAP1Q96EW2 488 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 P2RY11Q96G91 374 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 KATNAL1Q9BW62 490 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 GATA5Q9BWX5 397 aaPredicted RBP15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 MIEF1Q9NQG6 463 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 ZNF112Q9UJU3 913 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 GPIP06744 558 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 LINC00032P0C843 101 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 NBPF12Q5TAG4 269 aaPredicted RBP15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 TCAIMQ8N3R3 496 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 PPP3R2Q96LZ3 170 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 KLHL1Q9NR64 748 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 SLC22A3O75751 556 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 COL6A2P12110 1019 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 RPL26P61254 145 aaKnown RBP15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 GLYATQ6IB77 296 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 SLC51AQ86UW1 340 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 CAMKK1Q8N5S9 505 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 CDYL2Q8N8U2 506 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 CLN6Q9NWW5 311 aa15.88■□□□□ 0.13
RBFOX1-212ENST00000550418 BCLAF3A2AJT9 711 aaKnown RBP15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 PAICSP22234 425 aaKnown RBP15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 PPP2R1BP30154 601 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 DSG3P32926 999 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 CDC73Q6P1J9 531 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 PLET1Q6UQ28 207 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 RAB43Q86YS6 212 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 OR2T12Q8NG77 320 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 OR52K2Q8NGK3 314 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 FBXO32Q969P5 355 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 HSFY1Q96LI6 401 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 CATSPERZQ9NTU4 200 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 FADS2O95864 444 aaKnown RBP15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 CCNE2O96020 404 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 CYP4B1P13584 511 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 GRK3P35626 688 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 PIK3CGP48736 1102 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 BACE1P56817 501 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 OLR1P78380 273 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 CDH18Q13634 790 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 MZT2AQ6P582 158 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 NODALQ96S42 347 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 ACSS2Q9NR19 701 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 FZD1Q9UP38 647 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 STX11O75558 287 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 TGFB3P10600 412 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 CHRNB2P17787 502 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 CYP2B6P20813 491 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 ECT2LQ008S8 904 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 PSMD5Q16401 504 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 SYT12Q8IV01 421 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 PLD5Q8N7P1 536 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 PANX3Q96QZ0 392 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 MUC13Q9H3R2 512 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 ARHGAP28Q9P2N2 729 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 U3KQV3 271 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 SLC12A8A0AV02 714 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 ENDOD1O94919 500 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 STXBP5Q5T5C0 1151 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 P2RY8Q86VZ1 359 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 KRT78Q8N1N4 520 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 CPSF7Q8N684 471 aaKnown RBP15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 NACC2Q96BF6 587 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 ERLEC1Q96DZ1 483 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 VPS35Q96QK1 796 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 ULBP1Q9BZM6 244 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 TRPC4Q9UBN4 977 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 CARD8Q9Y2G2 431 aa15.87■□□□□ 0.13
RBFOX1-212ENST00000550418 TK2O00142 265 aa15.86■□□□□ 0.13
RBFOX1-212ENST00000550418 UGT1A9O60656 530 aa15.86■□□□□ 0.13
RBFOX1-212ENST00000550418 ERCC2P18074 760 aa15.86■□□□□ 0.13
RBFOX1-212ENST00000550418 UGT1A6P19224 532 aa15.86■□□□□ 0.13
RBFOX1-212ENST00000550418 UGT1A1P22309 533 aa15.86■□□□□ 0.13
RBFOX1-212ENST00000550418 UGT1A4P22310 534 aa15.86■□□□□ 0.13
RBFOX1-212ENST00000550418 WARSP23381 471 aaKnown RBP15.86■□□□□ 0.13
RBFOX1-212ENST00000550418 UGT1A3P35503 534 aa15.86■□□□□ 0.13
RBFOX1-212ENST00000550418 UGT1A5P35504 534 aa15.86■□□□□ 0.13
RBFOX1-212ENST00000550418 OR1G1P47890 313 aa15.86■□□□□ 0.13
RBFOX1-212ENST00000550418 TRIM32Q13049 653 aa15.86■□□□□ 0.13
RBFOX1-212ENST00000550418 ATAD3BQ5T9A4 648 aa15.86■□□□□ 0.13
RBFOX1-212ENST00000550418 SKA1Q96BD8 255 aa15.86■□□□□ 0.13
RBFOX1-212ENST00000550418 UGT1A7Q9HAW7 530 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms