RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 TFAP2DQ7Z6R9 452 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 EMC1Q8N766 993 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 MSANTD4Q8NCY6 345 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 OR7D4Q8NG98 312 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 ASB12Q8WXK4 309 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 ISG20Q96AZ6 181 aaKnown RBP12.35□□□□□ -0.43
DDX54-206ENST00000549271 CFAP57Q96MR6 1250 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 TMEM74Q96NL1 305 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 LENG8Q96PV6 779 aaPredicted RBP12.35□□□□□ -0.43
DDX54-206ENST00000549271 KLF6Q99612 283 aaPredicted RBP12.35□□□□□ -0.43
DDX54-206ENST00000549271 AGPAT1Q99943 283 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 C11orf70Q9BRQ4 267 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 SYT11Q9BT88 431 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 LRRC61Q9BV99 259 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 ZYG11BQ9C0D3 744 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 RAB6CQ9H0N0 254 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 IPO11Q9UI26 975 aaKnown RBP12.35□□□□□ -0.43
DDX54-206ENST00000549271 PNMA8BQ9ULN7 279 aaPredicted RBP12.35□□□□□ -0.43
DDX54-206ENST00000549271 SRPK3Q9UPE1 567 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 FADS3Q9Y5Q0 445 aa12.35□□□□□ -0.43
DDX54-206ENST00000549271 A0A1B0GTH6 734 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 YY2O15391 372 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 PAK4O96013 591 aaPredicted RBP12.34□□□□□ -0.43
DDX54-206ENST00000549271 ANXA6P08133 673 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 ADRB3P13945 408 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 ETFBP38117 255 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 GSCP56915 257 aaPredicted RBP12.34□□□□□ -0.43
DDX54-206ENST00000549271 PFN3P60673 137 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 ARF5P84085 180 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 GNA12Q03113 381 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 ZFP36L1Q07352 338 aaKnown RBP12.34□□□□□ -0.43
DDX54-206ENST00000549271 C1orf61Q13536 156 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 NR1I3Q14994 352 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 CARD16Q5EG05 197 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 PRRT3Q5FWE3 981 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 ESRP1Q6NXG1 681 aaKnown RBP12.34□□□□□ -0.43
DDX54-206ENST00000549271 PHF13Q86YI8 300 aaPredicted RBP12.34□□□□□ -0.43
DDX54-206ENST00000549271 SDR16C5Q8N3Y7 309 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 JOSD2Q8TAC2 188 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 GRIN3AQ8TCU5 1115 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 RXFP2Q8WXD0 754 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 USP7Q93009 1102 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 RAB7BQ96AH8 199 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 CCDC74AQ96AQ1 378 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 TMEM159Q96B96 161 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 FEM1CQ96JP0 617 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 HEPHQ9BQS7 1158 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 B3GNT4Q9C0J1 378 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 CLPBQ9H078 707 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 TNKS2Q9H2K2 1166 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 CBX8Q9HC52 389 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 ATP13A1Q9HD20 1204 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 METTL5Q9NRN9 209 aaKnown RBP12.34□□□□□ -0.43
DDX54-206ENST00000549271 ADAM22Q9P0K1 906 aa12.34□□□□□ -0.43
DDX54-206ENST00000549271 APOBEC3BQ9UH17 382 aaKnown RBP12.34□□□□□ -0.43
DDX54-206ENST00000549271 MED13Q9UHV7 2174 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 LRP4O75096 1905 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 TCRBV5S1A1TA0A578 114 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 C2CD4BA6NLJ0 364 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 FPGTO14772 594 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 TSPAN6O43657 245 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 SRGAP2O75044 1071 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 CD160O95971 181 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 RPLP0P05388 317 aaKnown RBP12.33□□□□□ -0.44
DDX54-206ENST00000549271 FERP16591 822 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 CCNHP51946 323 aaPredicted RBP12.33□□□□□ -0.44
DDX54-206ENST00000549271 C15orf59Q2T9L4 293 aaPredicted RBP12.33□□□□□ -0.44
DDX54-206ENST00000549271 CCDC14Q49A88 953 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 MANEALQ5VSG8 457 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 MON1BQ7L1V2 547 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 PHACTR4Q8IZ21 702 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 ARL10Q8N8L6 244 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 C9orf43Q8TAL5 461 aaPredicted RBP12.33□□□□□ -0.44
DDX54-206ENST00000549271 CENPIQ92674 756 aaPredicted RBP12.33□□□□□ -0.44
DDX54-206ENST00000549271 SPON2Q9BUD6 331 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 C1QTNF2Q9BXJ5 285 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 LRRN3Q9H3W5 708 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 MYO6Q9UM54 1294 aa12.33□□□□□ -0.44
DDX54-206ENST00000549271 RP1L1Q8IWN7 2480 aaPredicted RBP12.33□□□□□ -0.44
DDX54-206ENST00000549271 TSHRP16473 764 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 POU3F2P20265 443 aaPredicted RBP12.32□□□□□ -0.44
DDX54-206ENST00000549271 RFC1P35251 1148 aaPredicted RBP12.32□□□□□ -0.44
DDX54-206ENST00000549271 NSFP46459 744 aaKnown RBP12.32□□□□□ -0.44
DDX54-206ENST00000549271 MAPKAPK2P49137 400 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 RIPPLY3P57055 190 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 GEMIN4P57678 1058 aaKnown RBP12.32□□□□□ -0.44
DDX54-206ENST00000549271 ATP11AP98196 1134 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 FILIP1LQ4L180 1135 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 E4F1Q66K89 784 aaPredicted RBP12.32□□□□□ -0.44
DDX54-206ENST00000549271 WDR59Q6PJI9 974 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 PARS2Q7L3T8 475 aaKnown RBP12.32□□□□□ -0.44
DDX54-206ENST00000549271 LUZP1Q86V48 1076 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 NLRP14Q86W24 1093 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 ATCAYQ86WG3 371 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 FAM131BQ86XD5 332 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 KYQ8NBH2 561 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 DENND6BQ8NEG7 585 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 NKD1Q969G9 470 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 VOPP1Q96AW1 172 aa12.32□□□□□ -0.44
DDX54-206ENST00000549271 EPAS1Q99814 870 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms