RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 MAP6D1Q9H9H5 199 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 SPATS2LQ9NUQ6 558 aaKnown RBP4.3□□□□□ -1.72
PTCH1-216ENST00000548379 PCDHA12Q9UN75 941 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 FRMD4BQ9Y2L6 1034 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 SLC45A1Q9Y2W3 748 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 RAI2Q9Y5P3 530 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 KCNE2Q9Y6J6 123 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 SLIT1O75093 1534 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 DUOX2Q9NRD8 1548 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 ARHGAP23Q9P227 1491 aa4.3□□□□□ -1.72
PTCH1-216ENST00000548379 FGD6Q6ZV73 1430 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 NCOA3Q9Y6Q9 1424 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 IQGAP1P46940 1657 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 ARHGEF5Q12774 1597 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 A0A096LPK6 155 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 A0A0U1RQF3 1178 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 A0A1W2PPC1 479 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 GAGE12JA6NER3 117 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 LIPT2A6NK58 231 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 NPIPB11E5RHQ5 1161 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 K7ENM7 598 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 MDM4O15151 490 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 LIASO43766 372 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 GFPT2O94808 682 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 SEC31AO94979 1220 aaKnown RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 FGF2P09038 288 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 PRR35P0CG20 571 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 SRD5A1P18405 259 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 CDH2P19022 906 aaPredicted RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 FBLP22087 321 aaKnown RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 POU1F1P28069 291 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 ARL3P36405 182 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 CXCR3P49682 368 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 RARSP54136 660 aaKnown RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 ARF3P61204 181 aaPredicted RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 ARF1P84077 181 aaKnown RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 SMN1Q16637 294 aaKnown RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 ALG11Q2TAA5 492 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 PLEKHO1Q53GL0 409 aaPredicted RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 NCAPH2Q6IBW4 605 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 TMEM71Q6P5X7 295 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 NCEH1Q6PIU2 408 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 C16orf54Q6UWD8 224 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 GPAT4Q86UL3 456 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 ANKRD13BQ86YJ7 626 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 SRRM1Q8IYB3 904 aaKnown RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 RBFAQ8N0V3 343 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 LRRC57Q8N9N7 239 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 C16orf52Q8NHV5 167 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 PSPC1Q8WXF1 523 aaKnown RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 ATOH1Q92858 354 aaPredicted RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 LRRC59Q96AG4 307 aaKnown RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 FAM149B1Q96BN6 582 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 ZNF333Q96JL9 665 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 H2AFJQ9BTM1 129 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 KLHL31Q9H511 634 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 MVB12BQ9H7P6 319 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 PRKRIP1Q9H875 184 aaPredicted RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 NSMCE4AQ9NXX6 385 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 ABI3Q9P2A4 366 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 LIMA1Q9UHB6 759 aaKnown RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 BTBD3Q9Y2F9 522 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 ADAM18Q9Y3Q7 739 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 PRDM15P57071 1507 aaPredicted RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 NKTRP30414 1462 aaKnown RBP4.29□□□□□ -1.72
PTCH1-216ENST00000548379 CDC42BPAQ5VT25 1732 aa4.29□□□□□ -1.72
PTCH1-216ENST00000548379 PLEKHG1Q9ULL1 1385 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 EFCAB6Q5THR3 1501 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 A0A1W2PRG0 241 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 HSPB2A8KAH6 182 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 AGAP14A8MT82 685 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 KCNU1A8MYU2 1149 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 ADAM10O14672 748 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 KLK8O60259 260 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 CLDN7O95471 211 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 TFP02787 698 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 KLKB1P03952 638 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 EIF2S1P05198 315 aaKnown RBP4.28□□□□□ -1.72
PTCH1-216ENST00000548379 MMP3P08254 477 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 SPARCP09486 303 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 IRF1P10914 325 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 KELP23276 732 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 CDAP32320 146 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 DCTDP32321 178 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 PBX3P40426 434 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 HDAC4P56524 1084 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 FOXD4Q12950 439 aaPredicted RBP4.28□□□□□ -1.72
PTCH1-216ENST00000548379 PDE1CQ14123 709 aaPredicted RBP4.28□□□□□ -1.72
PTCH1-216ENST00000548379 TRIP6Q15654 476 aaKnown RBP4.28□□□□□ -1.72
PTCH1-216ENST00000548379 INPP5JQ15735 1006 aaPredicted RBP4.28□□□□□ -1.72
PTCH1-216ENST00000548379 HSPB2Q16082 182 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 HIST2H2ACQ16777 129 aaPredicted RBP4.28□□□□□ -1.72
PTCH1-216ENST00000548379 Q4G0T1 1027 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 MORN5Q5VZ52 161 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 ZKSCAN2Q63HK3 967 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 SLC2A7Q6PXP3 512 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 CYP20A1Q6UW02 462 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 TBC1D26Q86UD7 250 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 CNGA4Q8IV77 575 aa4.28□□□□□ -1.72
PTCH1-216ENST00000548379 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms