RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 CCDC66A2RUB6 948 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 GOLGA6L3A6NEY3 463 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 KCNK1O00180 336 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 MAGEC1O60732 1142 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 NEBLO76041 1014 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 TM7SF2O76062 418 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 KCNK5O95279 499 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 JCHAINP01591 159 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 HLA-DQB2P05538 268 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 CSRP1P21291 193 aaKnown RBP18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 CTNNA2P26232 953 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 MMP12P39900 470 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 NR2C2P49116 596 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 PEX5P50542 639 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 FAM193AP78312 1265 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 AP1B1Q10567 949 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 PPM1JQ5JR12 505 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 ALG1LQ6GMV1 187 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 GCNT7Q6ZNI0 430 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 PIP4P1Q86T03 277 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 NT5DC3Q86UY8 548 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 PDCD6IPQ8WUM4 868 aaKnown RBP18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 SPOCK2Q92563 424 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 LENG8Q96PV6 779 aaPredicted RBP18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 TTLL3Q9Y4R7 772 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 PCDHB9Q9Y5E1 797 aa18.86■□□□□ 0.61
PRPF40B-206ENST00000547764 SPTBN2O15020 2390 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 A0A1W2PQ67 120 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 PPP1R12AO14974 1030 aaPredicted RBP18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 DFNA5O60443 496 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 THEGLP0DJG4 465 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 PECAM1P16284 738 aaPredicted RBP18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 TGM2P21980 687 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 KCNA4P22459 653 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 IFI35P80217 286 aaPredicted RBP18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 DSC2Q02487 901 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 ZBTB17Q13105 803 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 IHHQ14623 411 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 PPP2R5EQ16537 467 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 B4GALNT4Q76KP1 1039 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 BZW1Q7L1Q6 419 aaKnown RBP18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 ABI3BPQ7Z7G0 1075 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 SYCE1Q8N0S2 351 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 DEFB124Q8NES8 71 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 OR13H1Q8NG92 308 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 ARRDC2Q8TBH0 407 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 BMFQ96LC9 184 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 ELF4Q99607 663 aaPredicted RBP18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 IL12RB2Q99665 862 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 HEMGNQ9BXL5 484 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 BRD8Q9H0E9 1235 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 HAUS2Q9NVX0 235 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 AMFRQ9UKV5 643 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 PCDHGB2Q9Y5G2 931 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 CACNA1AO00555 2505 aa18.85■□□□□ 0.61
PRPF40B-206ENST00000547764 A0A1B0GTQ1 180 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 POM121BA6NF01 834 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 GIPC1O14908 333 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 SH3BP5O60239 455 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 CES1P23141 567 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 LIG3P49916 1009 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 CCT8P50990 548 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 NOVA1P51513 510 aaKnown RBP18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 RWDD2BP57060 319 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 COPS2P61201 443 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 IL9RQ01113 521 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 NIPAL4Q0D2K0 466 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 RALGDSQ12967 914 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 FAM182AQ5T1J6 154 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 PSAPL1Q6NUJ1 521 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 DBX2Q6ZNG2 339 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 Q6ZSR6 202 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 BBS12Q6ZW61 710 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 PEX26Q7Z412 305 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 CNTD1Q8N815 330 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 DENND6BQ8NEG7 585 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 ALG3Q92685 438 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 P3H4Q92791 437 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 CENPTQ96BT3 561 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 ERVMER34-1Q9H9K5 563 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 COQ6Q9Y2Z9 468 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 RAI2Q9Y5P3 530 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 CAPN6Q9Y6Q1 641 aa18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 TP53BP1Q12888 1972 aaPredicted RBP18.84■□□□□ 0.61
PRPF40B-206ENST00000547764 A6NNZ2 444 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 FPGTO14772 594 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 PGLSO95336 258 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 FTCDO95954 541 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 CPP00450 1065 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 C6P13671 934 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 CEACAM1P13688 526 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 PRKD1Q15139 912 aaPredicted RBP18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 SHBQ15464 509 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 ARMC12Q5T9G4 340 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 KYAT3Q6YP21 454 aaKnown RBP18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 DPPA4Q7L190 304 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 PTAR1Q7Z6K3 402 aaPredicted RBP18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 RNF10Q8N5U6 811 aaKnown RBP18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 FAM174AQ8TBP5 190 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms