RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 SEC14L5O43304 696 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 ETFAP13804 333 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 CDAP32320 146 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 DCTDP32321 178 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 SELENOVP59797 346 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 ZKSCAN2Q63HK3 967 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 MZT2BQ6NZ67 158 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 SFTPA2Q8IWL1 248 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 TMEM163Q8TC26 289 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 INPP5DQ92835 1189 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 APOLD1Q96LR9 279 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 TMX4Q9H1E5 349 aaPredicted RBP6.34□□□□□ -1.39
NPAS3-204ENST00000546849 SH2D4AQ9H788 454 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 KIF9Q9HAQ2 790 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 MAGEE1Q9HCI5 957 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 FBRSL1Q9HCM7 1045 aaKnown RBP6.34□□□□□ -1.39
NPAS3-204ENST00000546849 CYSLTR2Q9NS75 346 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 RRP7BPQ9NSQ0 103 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 MAP3K20Q9NYL2 800 aaKnown RBP6.34□□□□□ -1.39
NPAS3-204ENST00000546849 DLGAP2Q9P1A6 1054 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 PIAS3Q9Y6X2 628 aa6.34□□□□□ -1.39
NPAS3-204ENST00000546849 ERCC6L2Q5T890 1561 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 LY6G6EA0A0G2JKS1 128 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 FAM237BA0A1B0GVD1 139 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 B4DGG1 531 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 NPIPB11E5RHQ5 1161 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 GTPBP1O00178 669 aaKnown RBP6.33□□□□□ -1.4
NPAS3-204ENST00000546849 ASAP2O43150 1006 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 IPO7O95373 1038 aaKnown RBP6.33□□□□□ -1.4
NPAS3-204ENST00000546849 CD58P19256 250 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 ICAM3P32942 547 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 PBX3P40426 434 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 MED22Q15528 200 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 DUSP6Q16828 381 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 FSCBQ5H9T9 825 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 DNTTIP2Q5QJE6 756 aaKnown RBP6.33□□□□□ -1.4
NPAS3-204ENST00000546849 SNX30Q5VWJ9 437 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 DAB2IPQ5VWQ8 1189 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 TMEM154Q6P9G4 183 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 IKBIPQ70UQ0 350 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 TRILQ7L0X0 811 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 TMEM116Q8NCL8 245 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 NEK9Q8TD19 979 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 SF3B5Q9BWJ5 86 aaKnown RBP6.33□□□□□ -1.4
NPAS3-204ENST00000546849 FTOQ9C0B1 505 aaKnown RBP eCLIP6.33□□□□□ -1.4
NPAS3-204ENST00000546849 FAM234AQ9H0X4 552 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 SYNCQ9H7C4 482 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 ZBTB40Q9NUA8 1239 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 RNF7Q9UBF6 113 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 INTS6Q9UL03 887 aaKnown RBP6.33□□□□□ -1.4
NPAS3-204ENST00000546849 FZD10Q9ULW2 581 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 CAPN7Q9Y6W3 813 aa6.33□□□□□ -1.4
NPAS3-204ENST00000546849 NDUFB4O95168 129 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 LAMP2P13473 410 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 SORDQ00796 357 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 GRIK3Q13003 919 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 NEDD9Q14511 834 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 DRAP1Q14919 205 aaPredicted RBP6.32□□□□□ -1.4
NPAS3-204ENST00000546849 SLC45A4Q5BKX6 768 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 GPATCH4Q5T3I0 446 aaKnown RBP6.32□□□□□ -1.4
NPAS3-204ENST00000546849 NEK10Q6ZWH5 1172 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 TEX45Q8NA69 505 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 SCCPDHQ8NBX0 429 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 ARHGEF2Q92974 986 aaKnown RBP6.32□□□□□ -1.4
NPAS3-204ENST00000546849 ZNF778Q96MU6 729 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 NCAPGQ9BPX3 1015 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 TREX2Q9BQ50 279 aaPredicted RBP6.32□□□□□ -1.4
NPAS3-204ENST00000546849 ASAH2Q9NR71 780 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 TMEM51Q9NW97 253 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 HIF1ANQ9NWT6 349 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 CISD1Q9NZ45 108 aaKnown RBP6.32□□□□□ -1.4
NPAS3-204ENST00000546849 LSM4Q9Y4Z0 139 aaKnown RBP6.32□□□□□ -1.4
NPAS3-204ENST00000546849 LYVE1Q9Y5Y7 322 aa6.32□□□□□ -1.4
NPAS3-204ENST00000546849 A0A0U1RQF3 1178 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 TGFB1I1O43294 461 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 EIF2S1P05198 315 aaKnown RBP6.31□□□□□ -1.4
NPAS3-204ENST00000546849 ITGAXP20702 1163 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 CHATP28329 748 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 MLH1P40692 756 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 PIP4K2AP48426 406 aaPredicted RBP6.31□□□□□ -1.4
NPAS3-204ENST00000546849 DRG2P55039 364 aaKnown RBP6.31□□□□□ -1.4
NPAS3-204ENST00000546849 ST3GAL1Q11201 340 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 LAMB3Q13751 1172 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 FGFBP1Q14512 234 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 SOWAHAQ2M3V2 549 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 COL28A1Q2UY09 1125 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 NCEH1Q6PIU2 408 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 PCGF5Q86SE9 256 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 SCFD2Q8WU76 684 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 PSPC1Q8WXF1 523 aaKnown RBP6.31□□□□□ -1.4
NPAS3-204ENST00000546849 PABPC5Q96DU9 382 aaKnown RBP6.31□□□□□ -1.4
NPAS3-204ENST00000546849 MUC13Q9H3R2 512 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 KAT14Q9H8E8 782 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 HAUS2Q9NVX0 235 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 HCFC1R1Q9NWW0 138 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 IL36RNQ9UBH0 155 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 FBXO9Q9UK97 447 aaPredicted RBP6.31□□□□□ -1.4
NPAS3-204ENST00000546849 CORO1CQ9ULV4 474 aaPredicted RBP6.31□□□□□ -1.4
NPAS3-204ENST00000546849 ERVK-11Q9UQG0 969 aa6.31□□□□□ -1.4
NPAS3-204ENST00000546849 A0A1W2PRG0 241 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms