RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 ZFP90Q8TF47 636 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 LRRN4Q8WUT4 740 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 SLC10A4Q96EP9 437 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 CFAP36Q96G28 342 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 MAGED4Q96JG8 741 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 ZNF668Q96K58 619 aaPredicted RBP7.94□□□□□ -1.14
UBR1-202ENST00000546274 R3HDMLQ9H3Y0 253 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 TOR3AQ9H497 397 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 NMRK2Q9NPI5 230 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 ABCB10Q9NRK6 738 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 TOR4AQ9NXH8 423 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 PKD2L2Q9NZM6 624 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 SIRPGQ9P1W8 387 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 UBA2Q9UBT2 640 aaPredicted RBP7.94□□□□□ -1.14
UBR1-202ENST00000546274 CFL2Q9Y281 166 aa7.94□□□□□ -1.14
UBR1-202ENST00000546274 POLR2AP24928 1970 aaKnown RBP7.94□□□□□ -1.14
UBR1-202ENST00000546274 DDNO94850 711 aaPredicted RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 TNNC2P02585 160 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 CSH1P0DML2 217 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 CSH2P0DML3 217 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 ICAM2P13598 275 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 ENO3P13929 434 aaPredicted RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 CFL1P23528 166 aaKnown RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 CDH6P55285 790 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 C1QTNF8P60827 252 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 B2MP61769 119 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 FCHO2Q0JRZ9 810 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 FAM102AQ5T9C2 384 aaPredicted RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 ATF7IP2Q5U623 682 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 UNC5AQ6ZN44 842 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 OFCC1Q8IZS5 231 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 TCAIMQ8N3R3 496 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 SGCDQ92629 289 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 DPF3Q92784 378 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 FAF2Q96CS3 445 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 TMEM176AQ96HP8 235 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 METTL2AQ96IZ6 378 aaKnown RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 KLHL32Q96NJ5 620 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 RNF157Q96PX1 679 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 CDT1Q9H211 546 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 RAB6BQ9NRW1 208 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 ITGA11Q9UKX5 1188 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 VANGL2Q9ULK5 521 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 SLC15A5A6NIM6 579 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 M0QYV0 167 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 TK2O00142 265 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 ACKR2O00590 384 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 RAD51BO15315 384 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 GPC4O75487 556 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 RFPL2O75678 378 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 GSRP00390 522 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 KRT19P08727 400 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 RBL1P28749 1068 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 FMO4P31512 558 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 MLLT6P55198 1093 aaPredicted RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 MBTD1Q05BQ5 628 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 SNTA1Q13424 505 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 IRF5Q13568 498 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 MXD4Q14582 209 aaPredicted RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 HSDL1Q3SXM5 330 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 ZNF667Q5HYK9 610 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 FAXCQ5TGI0 409 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 PDPK2PQ6A1A2 396 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 ZFP1Q6P2D0 407 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 BNC2Q6ZN30 1099 aaPredicted RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 ZBTB49Q6ZSB9 765 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 FAM183BPQ6ZVS7 135 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 ARMC8Q8IUR7 673 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 CTAGE3PQ8IX95 158 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 PSMA8Q8TAA3 256 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 UBA3Q8TBC4 463 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 TRAPPC12Q8WVT3 735 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 TMA16Q96EY4 203 aaKnown RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 CLSTN3Q9BQT9 956 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 ADPGKQ9BRR6 497 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 BEGAINQ9BUH8 593 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 OR2B2Q9GZK3 357 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 DNAI2Q9GZS0 605 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 NOL11Q9H8H0 719 aaKnown RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 ADARB2Q9NS39 739 aaKnown RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 GJA3Q9Y6H8 435 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 MAU2Q9Y6X3 613 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 SCN1AP35498 2009 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 KCNN4O15554 427 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 HTRA2O43464 458 aaPredicted RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 SNNO75324 88 aaPredicted RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 ALDH1A2O94788 518 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 TOP3BO95985 862 aaKnown RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 HMGCRP04035 888 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 ITGB3P05106 788 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 COX4I1P13073 169 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 M6PRP20645 277 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 GPD1P21695 349 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 GALNT1Q10472 559 aaPredicted RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 BMPR2Q13873 1038 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 TRIM25Q14258 630 aaKnown RBP7.93□□□□□ -1.14
UBR1-202ENST00000546274 SNX17Q15036 470 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 CA9Q16790 459 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 CCDC14Q49A88 953 aa7.93□□□□□ -1.14
UBR1-202ENST00000546274 FAM160B1Q5W0V3 765 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms