RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ERAL1O75616 437 aaKnown RBP3.9□□□□□ -1.79
SCFD1-207ENST00000544052 BEST1O76090 585 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 DNTTP04053 509 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 PIP4K2AP48426 406 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-207ENST00000544052 SLC12A2P55011 1212 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 TMPRSS3P57727 454 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 YWHAZP63104 245 aaKnown RBP3.9□□□□□ -1.79
SCFD1-207ENST00000544052 GOLGA8DPQ0D2H9 430 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 PKP1Q13835 747 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 FGFBP1Q14512 234 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 ZNF268Q14587 947 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-207ENST00000544052 DPCR1Q3MIW9 517 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 ENTPD8Q5MY95 495 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 PDXDC1Q6P996 788 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 AAGABQ6PD74 315 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 PCSK4Q6UW60 755 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 CHST9Q7L1S5 443 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 EME1Q96AY2 570 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 SORCS2Q96PQ0 1159 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 BBS4Q96RK4 519 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 STRA6Q9BX79 667 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 ACTR5Q9H9F9 607 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-207ENST00000544052 PLK2Q9NYY3 685 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 HAO1Q9UJM8 370 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 ING1Q9UK53 422 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-207ENST00000544052 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.9□□□□□ -1.79
SCFD1-207ENST00000544052 ADGRL2O95490 1459 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 ARHGAP31Q2M1Z3 1444 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 ERBINQ96RT1 1412 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 KIF15Q9NS87 1388 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 NWD1Q149M9 1564 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 DPPA5A6NC42 116 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 FOXO6A8MYZ6 492 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 FZD7O75084 574 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 TSPAN9O75954 239 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 TMCC1O94876 653 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 TACR2P21452 398 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 MCM3P25205 808 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 PSMB10P40306 273 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 UBA7P41226 1012 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 CLCN5P51795 746 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 HDAC4P56524 1084 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 PROK1P58294 105 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 CSTF3Q12996 717 aaKnown RBP3.89□□□□□ -1.79
SCFD1-207ENST00000544052 KLF10Q13118 480 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 STIM1Q13586 685 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 RUNX2Q13950 521 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 HIST2H2BCQ6DN03 193 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 HIST2H2BDQ6DRA6 164 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 ZNF66Q6ZN08 573 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 MRGPRGQ86SM5 289 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 TBC1D26Q86UD7 250 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 NOXA1Q86UR1 476 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 CCDC105Q8IYK2 499 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 TAGAPQ8N103 731 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 AMER2Q8N7J2 671 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 LRRC57Q8N9N7 239 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 FAM149B1Q96BN6 582 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 MAP7D2Q96T17 732 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 YME1L1Q96TA2 773 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 SLF1Q9BQI6 1058 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 SH2D3AQ9BRG2 576 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 TKTL2Q9H0I9 626 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 SMARCAD1Q9H4L7 1026 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 PLEKHA4Q9H4M7 779 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 SH2D4AQ9H788 454 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 KIF9Q9HAQ2 790 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 CNOT8Q9UFF9 292 aaKnown RBP3.89□□□□□ -1.79
SCFD1-207ENST00000544052 TMEM131LA2VDJ0 1609 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 DISP3Q9P2K9 1392 aa3.89□□□□□ -1.79
SCFD1-207ENST00000544052 ADGRB3O60242 1522 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 MANSC4A6NHS7 340 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-207ENST00000544052 HSPB2A8KAH6 182 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 BCAT2O15382 392 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-207ENST00000544052 IGLV2-14P01704 120 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 ADRB2P07550 413 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 CD63P08962 238 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 IL7RP16871 459 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 ITGAXP20702 1163 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 RYKP34925 604 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 GDF5P43026 501 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 CXCR3P49682 368 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 CLCNKBP51801 687 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 F2RL1P55085 397 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 CDH8P55286 799 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 COL10A1Q03692 680 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 STK4Q13043 487 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 HSPB2Q16082 182 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 CPLX2Q6PUV4 134 aaKnown RBP3.88□□□□□ -1.79
SCFD1-207ENST00000544052 FAM83HQ6ZRV2 1179 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-207ENST00000544052 ADGRF2Q8IZF7 708 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 TMTC2Q8N394 836 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 WIPF2Q8TF74 440 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-207ENST00000544052 TMEM170AQ8WVE7 144 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 TMEM5Q9Y2B1 443 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 RAP2CQ9Y3L5 183 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 SNX8Q9Y5X2 465 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 NOS1P29475 1434 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 IQGAP3Q86VI3 1631 aa3.88□□□□□ -1.79
SCFD1-207ENST00000544052 NRXN3Q9Y4C0 1643 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms