RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 DUSP10Q9Y6W6 482 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 A8MXQ7 604 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 E7EWF7 191 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ATP2A1O14983 1001 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ASNA1O43681 348 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ATG13O75143 517 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 STSP08842 583 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 DDCP20711 480 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 GARSP41250 739 aaKnown RBP8.95□□□□□ -0.98
VPS13D-212ENST00000543766 OMPP47874 163 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 DNM2P50570 870 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 PPP5CP53041 499 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ITGA8P53708 1063 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 PMS2P3Q13401 168 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 POLD3Q15054 466 aaPredicted RBP8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ADRM1Q16186 407 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 PPP2R5EQ16537 467 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 AFMIDQ63HM1 303 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 GTF2IRD2BQ6EKJ0 949 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 GTF2IRD2Q86UP8 949 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 DCP2Q8IU60 420 aaKnown RBP8.95□□□□□ -0.98
VPS13D-212ENST00000543766 DNAJC10Q8IXB1 793 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 KIAA0319LQ8IZA0 1049 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 OR6J1Q8NGC5 347 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 MYDGFQ969H8 173 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 ELP4Q96EB1 424 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 GAL3ST4Q96RP7 486 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 WRNIP1Q96S55 665 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 CHID1Q9BWS9 393 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 SLC6A15Q9H2J7 730 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 SMOC1Q9H4F8 434 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 IGFLR1Q9H665 355 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 IL20RAQ9UHF4 553 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 SERTAD1Q9UHV2 236 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 SRPK3Q9UPE1 567 aa8.95□□□□□ -0.98
VPS13D-212ENST00000543766 TNS3Q68CZ2 1445 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 CFAP99D6REC4 459 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 PRPSAP2O60256 369 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 HDCP19113 662 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 RECQLP46063 649 aaPredicted RBP8.94□□□□□ -0.98
VPS13D-212ENST00000543766 FAM214AQ32MH5 1076 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 UGT3A2Q3SY77 523 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 MSANTD2Q6P1R3 559 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 LAYNQ6UX15 382 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 RBM23Q86U06 439 aaKnown RBP8.94□□□□□ -0.98
VPS13D-212ENST00000543766 SFRP1Q8N474 314 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 UTP4Q969X6 686 aaKnown RBP8.94□□□□□ -0.98
VPS13D-212ENST00000543766 MAGEE1Q9HCI5 957 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 IFT46Q9NQC8 304 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 NDE1Q9NXR1 346 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 CLEC5AQ9NY25 188 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 NINJ2Q9NZG7 142 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 CAPN6Q9Y6Q1 641 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 GOLGB1Q14789 3259 aaKnown RBP8.94□□□□□ -0.98
VPS13D-212ENST00000543766 UTRNP46939 3433 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 FAM92AA1XBS5 289 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 MTMR11A4FU01 709 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 TCAPO15273 167 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 UBOX5O94941 541 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 BMP15O95972 392 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 ITIH1P19827 911 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 PTPREP23469 700 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 CYLC1P35663 651 aaPredicted RBP8.94□□□□□ -0.98
VPS13D-212ENST00000543766 BTDP43251 543 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 CPA2P48052 419 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 SEC23AQ15436 765 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 PPM1LQ5SGD2 360 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 CHSY3Q70JA7 882 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 PLCZ1Q86YW0 608 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 DEPDC1BQ8WUY9 529 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 AFG1LQ8WV93 481 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 PROX1Q92786 737 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 RRNAD1Q96FB5 475 aaKnown RBP8.94□□□□□ -0.98
VPS13D-212ENST00000543766 KAZALD1Q96I82 304 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 GRIP2Q9C0E4 1043 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 CLPBQ9H078 707 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 CRISPLD2Q9H0B8 497 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 CNOT10Q9H9A5 744 aaKnown RBP8.94□□□□□ -0.98
VPS13D-212ENST00000543766 TRPV4Q9HBA0 871 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 NIT2Q9NQR4 276 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 STK36Q9NRP7 1315 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 SHANK3Q9BYB0 1731 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 A0A0G2JLW4 131 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 TEX13CA0A0J9YWL9 993 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 LOC390937A0A1W2PQ73 354 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 TRIM38O00635 465 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 PTP4A3O75365 173 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 TNNC2P02585 160 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 GCP02774 474 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 CLEC3BP05452 202 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 CAMLGP49069 296 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 CACNB1Q02641 598 aaPredicted RBP8.94□□□□□ -0.98
VPS13D-212ENST00000543766 PTPN11Q06124 597 aaPredicted RBP8.94□□□□□ -0.98
VPS13D-212ENST00000543766 MPP7Q5T2T1 576 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 FRA10AC1Q70Z53 315 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 FJX1Q86VR8 437 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 OR4D10Q8NGI6 311 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 ASAP3Q8TDY4 903 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 TCEAL3Q969E4 200 aa8.94□□□□□ -0.98
VPS13D-212ENST00000543766 NARS2Q96I59 477 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms