RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 CENPIQ92674 756 aaPredicted RBP19.47■□□□□ 0.71
SUDS3-204ENST00000543473 ZNF112Q9UJU3 913 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 BEX3Q00994 111 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 KLHDC10Q6PID8 442 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 AHI1Q8N157 1196 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 BCAS3Q9H6U6 928 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 CRNNQ9UBG3 495 aaPredicted RBP19.46■□□□□ 0.71
SUDS3-204ENST00000543473 TBC1D30Q9Y2I9 924 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 BUD23O43709 281 aaKnown RBP19.46■□□□□ 0.71
SUDS3-204ENST00000543473 ALOX15P16050 662 aaPredicted RBP19.46■□□□□ 0.71
SUDS3-204ENST00000543473 CDH18Q13634 790 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 SMARCD1Q96GM5 515 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 CSPG4P5Q96PW8 444 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 CATSPERZQ9NTU4 200 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 H3BN98 237 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 CBX4O00257 560 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 MLYCDO95822 493 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 ABCB1P08183 1280 aaPredicted RBP19.46■□□□□ 0.71
SUDS3-204ENST00000543473 NDUFA5Q16718 116 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 LEMD2Q8NC56 503 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 HASPINQ8TF76 798 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 PANX3Q96QZ0 392 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 CLEC4MQ9H2X3 399 aaPredicted RBP19.46■□□□□ 0.71
SUDS3-204ENST00000543473 KLHL20Q9Y2M5 609 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 TNPO3Q9Y5L0 923 aaKnown RBP19.46■□□□□ 0.71
SUDS3-204ENST00000543473 CSH1P0DML2 217 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 CSH2P0DML3 217 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 ALDH7A1P49419 539 aaKnown RBP19.46■□□□□ 0.71
SUDS3-204ENST00000543473 TAB1Q15750 504 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 DENND5AQ6IQ26 1287 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 RNF19BQ6ZMZ0 732 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 ARL10Q8N8L6 244 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 CDYL2Q8N8U2 506 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 HTRA1Q92743 480 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 SPRTNQ9H040 489 aaPredicted RBP19.46■□□□□ 0.71
SUDS3-204ENST00000543473 MTIF3Q9H2K0 278 aaKnown RBP19.46■□□□□ 0.71
SUDS3-204ENST00000543473 KLQ9UEF7 1012 aa19.46■□□□□ 0.71
SUDS3-204ENST00000543473 ONECUT3O60422 494 aaPredicted RBP19.45■□□□□ 0.7
SUDS3-204ENST00000543473 COL6A2P12110 1019 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 OR1E1P30953 314 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 RXRGP48443 463 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 LIMK2P53671 638 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 FAM43BQ6ZT52 329 aaPredicted RBP19.45■□□□□ 0.7
SUDS3-204ENST00000543473 DCAKDQ8WVC6 231 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 DYRK4Q9NR20 520 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 RIPK3Q9Y572 518 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 LSM1O15116 133 aaKnown RBP19.45■□□□□ 0.7
SUDS3-204ENST00000543473 ZNF7P17097 686 aaPredicted RBP19.45■□□□□ 0.7
SUDS3-204ENST00000543473 MATKP42679 507 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 GLT6D1Q7Z4J2 308 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 PROSER1Q86XN7 944 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 BSNDQ8WZ55 320 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 ARMC7Q9H6L4 198 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 OPTCQ9UBM4 332 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 COQ4Q9Y3A0 265 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 TRIM17Q9Y577 477 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 FAM208AQ9UK61 1670 aaKnown RBP19.45■□□□□ 0.7
SUDS3-204ENST00000543473 MYL12BO14950 172 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 NBNO60934 754 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 RPS9P46781 194 aaKnown RBP19.45■□□□□ 0.7
SUDS3-204ENST00000543473 THAP5Q7Z6K1 395 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 NKAPQ8N5F7 415 aaKnown RBP19.45■□□□□ 0.7
SUDS3-204ENST00000543473 FLCNQ8NFG4 579 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 ST13P5Q8NFI4 369 aaPredicted RBP19.45■□□□□ 0.7
SUDS3-204ENST00000543473 SLC35B2Q8TB61 432 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 RHOCP08134 193 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 PSEN2P49810 448 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 ITGA1P56199 1179 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 TRAP1Q12931 704 aaKnown RBP19.45■□□□□ 0.7
SUDS3-204ENST00000543473 GRIK3Q13003 919 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 MPP2Q14168 576 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 PRAMEF19Q5SWL8 479 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 PPP1R26Q5T8A7 1209 aaPredicted RBP19.45■□□□□ 0.7
SUDS3-204ENST00000543473 NAT8LQ8N9F0 302 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 ADI1Q9BV57 179 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 RNF19AQ9NV58 838 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 VWA7Q9Y334 891 aa19.45■□□□□ 0.7
SUDS3-204ENST00000543473 MAFO75444 373 aaPredicted RBP19.44■□□□□ 0.7
SUDS3-204ENST00000543473 TBX4P57082 545 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 EEF1DP3Q658K8 133 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 POTEHQ6S545 545 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 HIPK1Q86Z02 1210 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 OFCC1Q8IZS5 231 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 GPATCH1Q9BRR8 931 aaKnown RBP19.44■□□□□ 0.7
SUDS3-204ENST00000543473 CCNB1IP1Q9NPC3 277 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 MAGEL2Q9UJ55 1249 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 IGLV3-22A0A075B6J6 115 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 CASTOR2A6NHX0 329 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 G3V2T6 193 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 NPR3P17342 541 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 GPC1P35052 558 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 RHOAP61586 193 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 STXBP5Q5T5C0 1151 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 ERI1Q8IV48 349 aaKnown RBP19.44■□□□□ 0.7
SUDS3-204ENST00000543473 PPP1R13LQ8WUF5 828 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 SHISA4Q96DD7 197 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 CENPNQ96H22 339 aaPredicted RBP19.44■□□□□ 0.7
SUDS3-204ENST00000543473 RHOBTB2Q9BYZ6 727 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 MAGP20916 626 aa19.44■□□□□ 0.7
SUDS3-204ENST00000543473 PDPRQ8NCN5 879 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms