RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 NFKBIAP25963 317 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 GRK6P43250 576 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 CLDN2P57739 230 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 MAXP61244 160 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 AGERQ15109 404 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 PDK1Q15118 436 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 N4BP2L1Q5TBK1 243 aaPredicted RBP16.37■□□□□ 0.21
CIT-212ENST00000543239 SPOCD1Q6ZMY3 1216 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 BZW1Q7L1Q6 419 aaKnown RBP16.37■□□□□ 0.21
CIT-212ENST00000543239 KIAA1328Q86T90 577 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 RCOR2Q8IZ40 523 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 CCNYQ8ND76 341 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 OR13H1Q8NG92 308 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 RBM41Q96IZ5 413 aaKnown RBP16.37■□□□□ 0.21
CIT-212ENST00000543239 BMFQ96LC9 184 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 OLFM3Q96PB7 478 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 WRAP53Q9BUR4 548 aaKnown RBP16.37■□□□□ 0.21
CIT-212ENST00000543239 BRD8Q9H0E9 1235 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 PCOLCE2Q9UKZ9 415 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 PCDHGC4Q9Y5F7 938 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 DUSP10Q9Y6W6 482 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 CNOT1A5YKK6 2376 aaKnown RBP16.37■□□□□ 0.21
CIT-212ENST00000543239 ANKRD36A6QL64 1941 aa16.37■□□□□ 0.21
CIT-212ENST00000543239 TTC24A2A3L6 582 aaPredicted RBP16.36■□□□□ 0.21
CIT-212ENST00000543239 POM121BA6NF01 834 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 TOR1BO14657 336 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 PPP1R12AO14974 1030 aaPredicted RBP16.36■□□□□ 0.21
CIT-212ENST00000543239 CPP00450 1065 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 EPHA8P29322 1005 aaPredicted RBP16.36■□□□□ 0.21
CIT-212ENST00000543239 CTNNA1P35221 906 aaKnown RBP16.36■□□□□ 0.21
CIT-212ENST00000543239 RABIFP47224 123 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 NR2C2P49116 596 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 NAP1L1P55209 391 aaKnown RBP16.36■□□□□ 0.21
CIT-212ENST00000543239 FAM193AP78312 1265 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 IFI35P80217 286 aaPredicted RBP16.36■□□□□ 0.21
CIT-212ENST00000543239 SHBQ15464 509 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 TFDP3Q5H9I0 405 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 PRAMEF14Q5SWL7 426 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 Q6ZSR6 202 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 DPPA4Q7L190 304 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 PTAR1Q7Z6K3 402 aaPredicted RBP16.36■□□□□ 0.21
CIT-212ENST00000543239 EXD1Q8NHP7 514 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 BAHD1Q8TBE0 780 aaPredicted RBP16.36■□□□□ 0.21
CIT-212ENST00000543239 SETD7Q8WTS6 366 aaKnown RBP16.36■□□□□ 0.21
CIT-212ENST00000543239 CENPTQ96BT3 561 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 IFT43Q96FT9 208 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 LGMNQ99538 433 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 SEMA3CQ99985 751 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 RBM22Q9NW64 420 aaKnown RBP eCLIP16.36■□□□□ 0.21
CIT-212ENST00000543239 PCDHB9Q9Y5E1 797 aa16.36■□□□□ 0.21
CIT-212ENST00000543239 KNL1Q8NG31 2342 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 C6P13671 934 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 TGM2P21980 687 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 MARCKSL1P49006 195 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 LIG3P49916 1009 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 PFN3P60673 137 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 DYNLT1P63172 113 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 IL9RQ01113 521 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 ITKQ08881 620 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 KIF5AQ12840 1032 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 TRAF2Q12933 501 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 RALGDSQ12967 914 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 TRIP6Q15654 476 aaKnown RBP16.35■□□□□ 0.21
CIT-212ENST00000543239 PPP2R5EQ16537 467 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 GLRX5Q86SX6 157 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 SLC22A18ASQ8N1D0 253 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 TP53I13Q8NBR0 393 aaPredicted RBP16.35■□□□□ 0.21
CIT-212ENST00000543239 KIAA1524Q8TCG1 905 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 RHBDD1Q8TEB9 315 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 SAP25Q8TEE9 199 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 PDCD6IPQ8WUM4 868 aaKnown RBP16.35■□□□□ 0.21
CIT-212ENST00000543239 KRT35Q92764 455 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 CAMK1GQ96NX5 476 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 IL12RB2Q99665 862 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 CDC6Q99741 560 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 PHTF1Q9UMS5 762 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 PCDHA3Q9Y5H8 950 aa16.35■□□□□ 0.21
CIT-212ENST00000543239 hCG_1818297A0A087WSY0 165 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 SPTY2D1-AS1A0A0U1RR47 76 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 CCDC66A2RUB6 948 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 CST8O60676 142 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 PGLSO95336 258 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 PRKCGP05129 697 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 HLA-DQB2P05538 268 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 ITGAVP06756 1048 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 KRT10P13645 584 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 CA4P22748 312 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 CTNNA2P26232 953 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 IGFALSP35858 605 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 COPS2P61201 443 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 YPEL5P62699 121 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 SIM1P81133 766 aaPredicted RBP16.34■□□□□ 0.21
CIT-212ENST00000543239 DSC2Q02487 901 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 LRRC14Q15048 493 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 ARMC12Q5T9G4 340 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 NPNTQ6UXI9 565 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 LIPIQ6XZB0 460 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 CCDC50Q8IVM0 306 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 LRRC57Q8N9N7 239 aa16.34■□□□□ 0.21
CIT-212ENST00000543239 ARRDC2Q8TBH0 407 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms