RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 RPS3AP61247 264 aaKnown RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 ATP6V0D1P61421 351 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 C2orf54Q08AI8 447 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 TCF15Q12870 199 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 STK3Q13188 491 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 HNRNPDQ14103 355 aaKnown RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 GCKRQ14397 625 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 LPIN1Q14693 890 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 MTF1Q14872 753 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 BRDTQ58F21 947 aaPredicted RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 FAM133BQ5BKY9 247 aaKnown RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 HERC4Q5GLZ8 1057 aaPredicted RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 WDR45BQ5MNZ6 344 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 TMEM240Q5SV17 173 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 CCNJQ5T5M9 372 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 FAM160B1Q5W0V3 765 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 SNRNP48Q6IEG0 339 aaKnown RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 C1orf228Q6PIY5 440 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 LRRC74BQ6ZQY2 392 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 ADGRG6Q86SQ4 1221 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 ITIH5Q86UX2 942 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 ZBTB46Q86UZ6 589 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 GLCCI1Q86VQ1 547 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 MB21D2Q8IYB1 491 aaPredicted RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 SAMD14Q8IZD0 417 aaPredicted RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 ARHGAP24Q8N264 748 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 CARNMT1Q8N4J0 409 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 MINDY2Q8NBR6 621 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 KCNH5Q8NCM2 988 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 LILRB1Q8NHL6 650 aaPredicted RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 TBC1D16Q8TBP0 767 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 HSPBAP1Q96EW2 488 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 CEP19Q96LK0 163 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 CFAP57Q96MR6 1250 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 CTRCQ99895 268 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 UBAC1Q9BSL1 405 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 LRRC1Q9BTT6 524 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 TMEM109Q9BVC6 243 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 CRNKL1Q9BZJ0 848 aaKnown RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 TTYH3Q9C0H2 523 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 MOV10Q9HCE1 1003 aaKnown RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 SERHLQ9NQF3 203 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 SERTAD4Q9NUC0 356 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 TBC1D23Q9NUY8 699 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 PNPOQ9NVS9 261 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 ADD3Q9UEY8 706 aaKnown RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 ATPIF1Q9UII2 106 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 LNPEPQ9UIQ6 1025 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 ACAD8Q9UKU7 415 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 PA2G4Q9UQ80 394 aaKnown RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 ZNF711Q9Y462 761 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 FER1L4A9Z1Z3 1794 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 ANKRD36CQ5JPF3 1778 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 BCORQ6W2J9 1755 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 MYH3P11055 1940 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 COL18A1P39060 1754 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 ADAMTSL3P82987 1691 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 C1orf167Q5SNV9 1468 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 MACROD2A1Z1Q3 448 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 KIF28PB7ZC32 967 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 RASA4BC9J798 803 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 PFDN6O15212 129 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 ALOX15BO15296 676 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 RASA4O43374 803 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 MTA2O94776 668 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 HEXIM1O94992 359 aaKnown RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 GYPCP04921 128 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 IGKV5-2P06315 115 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 NUDT17P0C025 328 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 MYBP10242 640 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 HSPD1P10809 573 aaKnown RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 IL32P24001 234 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 MARK3P27448 753 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 GNA11P29992 359 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 GTF2H1P32780 548 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 CTNNA1P35221 906 aaKnown RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 RPL5P46777 297 aaKnown RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 PCYT1AP49585 367 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 BCAP31P51572 246 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 ARFIP2P53365 341 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 NUP107P57740 925 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 NOP14P78316 857 aaKnown RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 IRX4P78413 519 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 CEBPZQ03701 1054 aaKnown RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 MORC3Q14149 939 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 MAPRE2Q15555 327 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 MEA1Q16626 185 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 INSCQ1MX18 579 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 MYLK3Q32MK0 819 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 SNX30Q5VWJ9 437 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 LRRC8BQ6P9F7 803 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 PPP1R21Q6ZMI0 780 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 INTS8Q75QN2 995 aaKnown RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 APTXQ7Z2E3 356 aaKnown RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 ZNF551Q7Z340 670 aaPredicted RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 SLC51BQ86UW2 128 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 COL23A1Q86Y22 540 aaPredicted RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 ERI1Q8IV48 349 aaKnown RBP5.99□□□□□ -1.45
XRCC4-206ENST00000542685 FAM109AQ8N4B1 249 aa5.99□□□□□ -1.45
XRCC4-206ENST00000542685 TTC30BQ8N4P2 665 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms