RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 HAUS3Q68CZ6 603 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 DSTYKQ6XUX3 929 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 CREB3L2Q70SY1 520 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 BRINP3Q76B58 766 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 C2CD5Q86YS7 1000 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 HSCBQ8IWL3 235 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 NKAIN3Q8N8D7 197 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 ZMIZ2Q8NF64 920 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 LINS1Q8NG48 757 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 GPT2Q8TD30 523 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 RUBCNQ92622 972 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 CDHR1Q96JP9 859 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 LMLNQ96KR4 655 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 MYCBPQ99417 103 aaPredicted RBP3.73□□□□□ -1.81
LEMD3-204ENST00000542032 NUDT16L1Q9BRJ7 211 aaKnown RBP3.73□□□□□ -1.81
LEMD3-204ENST00000542032 SDF4Q9BRK5 362 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 CTDSP1Q9GZU7 261 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 CHODLQ9H9P2 273 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 PREBQ9HCU5 417 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 WDR6Q9NNW5 1121 aaKnown RBP3.73□□□□□ -1.81
LEMD3-204ENST00000542032 ZCCHC17Q9NP64 241 aaKnown RBP3.73□□□□□ -1.81
LEMD3-204ENST00000542032 IRAK4Q9NWZ3 460 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 NKIRAS2Q9NYR9 191 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 DERAQ9Y315 318 aa3.73□□□□□ -1.81
LEMD3-204ENST00000542032 MAGED1Q9Y5V3 778 aaPredicted RBP3.73□□□□□ -1.81
LEMD3-204ENST00000542032 A0A096LPK6 155 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 SMTNL1A8MU46 457 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 SLC16A5O15375 505 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 SERPINC1P01008 464 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 AKR1B1P15121 316 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 HNF1BP35680 557 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 MXI1P50539 228 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 CASP6P55212 293 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 ACTR2P61160 394 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 TUBA1BP68363 451 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 FAM27E3Q08E93 113 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 WASHC5Q12768 1159 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 HYAL1Q12794 435 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 GRSF1Q12849 480 aaKnown RBP eCLIP3.72□□□□□ -1.81
LEMD3-204ENST00000542032 ILF3Q12906 894 aaKnown RBP eCLIP3.72□□□□□ -1.81
LEMD3-204ENST00000542032 TRPC3Q13507 836 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 PLCB4Q15147 1175 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 C9orf50Q5SZB4 431 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 NAPEPLDQ6IQ20 393 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 DENND1BQ6P3S1 775 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 CUZD1Q86UP6 607 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 AFG1LQ8WV93 481 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 TMEM170AQ8WVE7 144 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 ATP6V1E2Q96A05 226 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 ZUFSPQ96AP4 578 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 RTP4Q96DX8 246 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 RNFT2Q96EX2 444 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 COG8Q96MW5 612 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 FIZ1Q96SL8 496 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 LHPPQ9H008 270 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 PAIP1Q9H074 479 aaKnown RBP3.72□□□□□ -1.81
LEMD3-204ENST00000542032 LMAN2LQ9H0V9 348 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 GHITMQ9H3K2 345 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 JMJD4Q9H9V9 463 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 MRGBPQ9NV56 204 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 GIMAP2Q9UG22 337 aa3.72□□□□□ -1.81
LEMD3-204ENST00000542032 A0A0U1RQJ8 604 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 A0A1B0GVM2 712 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.71□□□□□ -1.82
LEMD3-204ENST00000542032 TSPY2A6NKD2 308 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 ITM2AO43736 263 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 KCNJ13O60928 360 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 ADAP00813 363 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 TSPY3P0CV98 308 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 TSPY8P0CW00 308 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 CTPS1P17812 591 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 TTKP33981 857 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 UBA7P41226 1012 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 AARSP49588 968 aaKnown RBP eCLIP3.71□□□□□ -1.82
LEMD3-204ENST00000542032 ERVFC1-1P60608 527 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 TSPY1Q01534 308 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 ROR1Q01973 937 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 ST3GAL1Q11201 340 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 COASYQ13057 564 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 EFR3AQ14156 821 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 HLFQ16534 295 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 TSTQ16762 297 aaKnown RBP3.71□□□□□ -1.82
LEMD3-204ENST00000542032 ME3Q16798 604 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 IZUMO4Q1ZYL8 232 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 KIF19Q2TAC6 998 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 FBXO43Q4G163 708 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 CTXN3Q4LDR2 81 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 SPSB3Q6PJ21 355 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 H1FNTQ75WM6 255 aaPredicted RBP3.71□□□□□ -1.82
LEMD3-204ENST00000542032 FJX1Q86VR8 437 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 PALB2Q86YC2 1186 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 TCP11L2Q8N4U5 519 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 MIGA1Q8NAN2 632 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 TDRD7Q8NHU6 1098 aaKnown RBP3.71□□□□□ -1.82
LEMD3-204ENST00000542032 TMED6Q8WW62 240 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 RFFLQ8WZ73 363 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 ST8SIA4Q92187 359 aa3.71□□□□□ -1.82
LEMD3-204ENST00000542032 ATOH1Q92858 354 aaPredicted RBP3.71□□□□□ -1.82
LEMD3-204ENST00000542032 ZMAT2Q96NC0 199 aaKnown RBP3.71□□□□□ -1.82
LEMD3-204ENST00000542032 SLITRK1Q96PX8 696 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms