RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 PBX3P40426 434 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 STAT6P42226 847 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 MTNR1AP48039 350 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 CDH8P55286 799 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 YWHAZP63104 245 aaKnown RBP4.42□□□□□ -1.7
SNHG1-217ENST00000541578 IFI35P80217 286 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-217ENST00000541578 PFKFB3Q16875 520 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-217ENST00000541578 ZSCAN23Q3MJ62 389 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 ANXA2RQ3ZCQ2 193 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 ARL13AQ5H913 290 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-217ENST00000541578 BMP2KLQ5H9B9 411 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 PLEKHS1Q5SXH7 462 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 ATG9BQ674R7 924 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 TTI2Q6NXR4 508 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 AADACL2Q6P093 401 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 SLC30A9Q6PML9 568 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 DHRS13Q6UX07 377 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 RNF144BQ7Z419 303 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 VSIG1Q86XK7 387 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 TICAM1Q8IUC6 712 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 UEVLDQ8IX04 471 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-217ENST00000541578 GABPB2Q8TAK5 448 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-217ENST00000541578 PIGOQ8TEQ8 1089 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 SAT2Q96F10 170 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-217ENST00000541578 HMCESQ96FZ2 354 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 KAZALD1Q96I82 304 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 ADAD1Q96M93 576 aaKnown RBP4.42□□□□□ -1.7
SNHG1-217ENST00000541578 ZNF48Q96MX3 618 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-217ENST00000541578 H2AFJQ9BTM1 129 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 APOL6Q9BWW8 343 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 TEX12Q9BXU0 123 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 RABEP2Q9H5N1 569 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 ZWILCHQ9H900 591 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 TRNAU1APQ9NX07 287 aaKnown RBP4.42□□□□□ -1.7
SNHG1-217ENST00000541578 CDH22Q9UJ99 828 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 FZD4Q9ULV1 537 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 TNFSF13BQ9Y275 285 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 SIRT4Q9Y6E7 314 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-217ENST00000541578 SESN1Q9Y6P5 492 aa4.42□□□□□ -1.7
SNHG1-217ENST00000541578 PRDM15P57071 1507 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-217ENST00000541578 KANK1Q14678 1352 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 LRRIQ1Q96JM4 1722 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 C17orf113A0A1B0GUU1 675 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 MCIDASD6RGH6 385 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 CNTN5O94779 1100 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 KAT7O95251 611 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 IPO7O95373 1038 aaKnown RBP4.41□□□□□ -1.7
SNHG1-217ENST00000541578 FGBP02675 491 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 IGKV2-30P06310 120 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 ENO1P06733 434 aaKnown RBP4.41□□□□□ -1.7
SNHG1-217ENST00000541578 ACSL1P33121 698 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 DPP6P42658 865 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 NR4A2P43354 598 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 GNAQP50148 359 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 AIMP2Q13155 320 aaKnown RBP4.41□□□□□ -1.7
SNHG1-217ENST00000541578 SLC14A1Q13336 389 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 PPP2R5BQ15173 497 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 TAF11Q15544 211 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 ZNF667Q5HYK9 610 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 UBAP2Q5T6F2 1119 aaKnown RBP4.41□□□□□ -1.7
SNHG1-217ENST00000541578 TMEM268Q5VZI3 342 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 TSSK4Q6SA08 328 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 CHST9Q7L1S5 443 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 MRPL10Q7Z7H8 261 aaKnown RBP4.41□□□□□ -1.7
SNHG1-217ENST00000541578 FAM160B2Q86V87 743 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 KLBQ86Z14 1044 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 ADGRF3Q8IZF5 1079 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 PLD5Q8N7P1 536 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 POMGNT2Q8NAT1 580 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 TMEM116Q8NCL8 245 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 C16orf52Q8NHV5 167 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 C2CD4CQ8TF44 421 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 GTF3C6Q969F1 213 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 COQ8BQ96D53 544 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 NAF1Q96HR8 494 aaKnown RBP4.41□□□□□ -1.7
SNHG1-217ENST00000541578 SIGLEC11Q96RL6 698 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.41□□□□□ -1.71e-6■■□□□ 14.4
SNHG1-217ENST00000541578 FBRSL1Q9HCM7 1045 aaKnown RBP4.41□□□□□ -1.7
SNHG1-217ENST00000541578 ZCCHC17Q9NP64 241 aaKnown RBP4.41□□□□□ -1.7
SNHG1-217ENST00000541578 CCDC177Q9NQR7 707 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-217ENST00000541578 SNTG1Q9NSN8 517 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 MRGBPQ9NV56 204 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.41□□□□□ -1.7
SNHG1-217ENST00000541578 KIAA1456Q9P272 454 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 UPB1Q9UBR1 384 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 MORF4L1Q9UBU8 362 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 IPO11Q9UI26 975 aaKnown RBP4.41□□□□□ -1.7
SNHG1-217ENST00000541578 PKP3Q9Y446 797 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 ZNF711Q9Y462 761 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 NKTRP30414 1462 aaKnown RBP4.41□□□□□ -1.7
SNHG1-217ENST00000541578 PASKQ96RG2 1323 aa4.41□□□□□ -1.7
SNHG1-217ENST00000541578 TMEM2Q9UHN6 1383 aa4.4□□□□□ -1.7
SNHG1-217ENST00000541578 AGAP14A8MT82 685 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 H7C0S8 307 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 SNAP23O00161 211 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 CLGNO14967 610 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 ERAL1O75616 437 aaKnown RBP4.4□□□□□ -1.71
SNHG1-217ENST00000541578 GJB3O75712 270 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 RB1P06400 928 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms