RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ATXN1LP0C7T5 689 aaKnown RBP9.41□□□□□ -0.9
DDX55-208ENST00000541259 MYBL2P10244 700 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 SLC8A1P32418 973 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 PSMD8P48556 350 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 VSNL1P62760 191 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 TUBB4BP68371 445 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 SATB1Q01826 763 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 RAD51Q06609 339 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 CALCOCO2Q13137 446 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 MORF4L2Q15014 288 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 ELF2Q15723 593 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 SLC14A2Q15849 920 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 SIRPB2Q5JXA9 342 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 EOGTQ5NDL2 527 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 FNBP1LQ5T0N5 605 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 CWF19L1Q69YN2 538 aaKnown RBP9.41□□□□□ -0.9
DDX55-208ENST00000541259 RANBP10Q6VN20 620 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 PCGF5Q86SE9 256 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 CAND1Q86VP6 1230 aaKnown RBP9.41□□□□□ -0.9
DDX55-208ENST00000541259 CACUL1Q86Y37 369 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 IFT20Q8IY31 132 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 SYNPOQ8N3V7 929 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 TMIEQ8NEW7 156 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 MYRIPQ8NFW9 859 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 PIP4K2CQ8TBX8 421 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 PIH1D2Q8WWB5 315 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 CLDN23Q96B33 292 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 ARRDC3Q96B67 414 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 IFT43Q96FT9 208 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 FEM1CQ96JP0 617 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 TUBGCP5Q96RT8 1024 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 PARD6BQ9BYG5 372 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 SLC6A16Q9GZN6 736 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 MKRN2Q9H000 416 aaKnown RBP9.41□□□□□ -0.9
DDX55-208ENST00000541259 RSPH9Q9H1X1 276 aaPredicted RBP9.41□□□□□ -0.9
DDX55-208ENST00000541259 LRRC40Q9H9A6 602 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 CASS4Q9NQ75 786 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 EIF2B3Q9NR50 452 aaKnown RBP9.41□□□□□ -0.9
DDX55-208ENST00000541259 VPS45Q9NRW7 570 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 NFU1Q9UMS0 254 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 PCDHB9Q9Y5E1 797 aa9.41□□□□□ -0.9
DDX55-208ENST00000541259 ZDBF2Q9HCK1 2354 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 A0A0U1RQS6 177 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 GOLGA6CA6NDK9 693 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 GOLGA6BA6NDN3 693 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 C16orf96A6NNT2 1141 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 ERI2A8K979 691 aaKnown RBP9.4□□□□□ -0.9
DDX55-208ENST00000541259 ALOX15BO15296 676 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 MID1O15344 667 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 CTIFO43310 598 aaKnown RBP9.4□□□□□ -0.9
DDX55-208ENST00000541259 PGLSO95336 258 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 IL1BP01584 269 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 PRNPP04156 253 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 PIRTP0C851 137 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 GOLGA6DP0CG33 693 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 TIMP2P16035 220 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 CTPS1P17812 591 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 SERPINA4P29622 427 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 MAPK8P45983 427 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 RPS14P62263 151 aaKnown RBP9.4□□□□□ -0.9
DDX55-208ENST00000541259 SEMG2Q02383 582 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 MSLNQ13421 630 aaPredicted RBP9.4□□□□□ -0.9
DDX55-208ENST00000541259 ELAVL3Q14576 367 aaKnown RBP9.4□□□□□ -0.9
DDX55-208ENST00000541259 STARD3Q14849 445 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 E2F5Q15329 346 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 SLC1A5Q15758 541 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 CRY1Q16526 586 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 HSF5Q4G112 596 aaPredicted RBP9.4□□□□□ -0.9
DDX55-208ENST00000541259 LRRC73Q5JTD7 316 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 CERCAMQ5T4B2 595 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 ARMC12Q5T9G4 340 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 NAPEPLDQ6IQ20 393 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 LRRC8BQ6P9F7 803 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 PPP1R21Q6ZMI0 780 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 CCNI2Q6ZMN8 369 aaPredicted RBP9.4□□□□□ -0.9
DDX55-208ENST00000541259 HOOK3Q86VS8 718 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 TMPRSS6Q8IU80 811 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 AGGF1Q8N302 714 aaeCLIP9.4□□□□□ -0.9
DDX55-208ENST00000541259 GPR161Q8N6U8 529 aaKnown RBP9.4□□□□□ -0.9
DDX55-208ENST00000541259 BBOF1Q8ND07 529 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 MCUQ8NE86 351 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 LPCAT1Q8NF37 534 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 OR2T3Q8NH03 318 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 ECHDC3Q96DC8 303 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 ZNF641Q96N77 438 aaPredicted RBP9.4□□□□□ -0.9
DDX55-208ENST00000541259 SERPINB12Q96P63 405 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 PPP1R2P1Q96PQ5 205 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 FSD1LQ9BXM9 530 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 OSBPL6Q9BZF3 934 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 MFSD1Q9H3U5 465 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 GOLGA6AQ9NYA3 693 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 SHOC2Q9UQ13 582 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 SIT1Q9Y3P8 196 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 SPO11Q9Y5K1 396 aa9.4□□□□□ -0.9
DDX55-208ENST00000541259 TCRBV21S2A2A0A5A6 115 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 TSPAN11A1L157 253 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 TMEM221A6NGB7 291 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 A8MX80 341 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 ANKRD66B4E2M5 251 aa9.39□□□□□ -0.91
DDX55-208ENST00000541259 M0R296 226 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms