RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 DGKGP49619 791 aa14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 VASPP50552 380 aaPredicted RBP14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 PPP2R2AP63151 447 aa14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 ECT2LQ008S8 904 aa14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 NLRP9Q7RTR0 991 aa14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 TRABD2AQ86V40 505 aa14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 EXOC3L1Q86VI1 746 aa14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 PPM1NQ8N819 430 aa14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 NAT16Q8N8M0 369 aa14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 ZFYVE19Q96K21 471 aa14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 EBF3Q9H4W6 596 aa14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 ECT2Q9H8V3 914 aa14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 TREX1Q9NSU2 369 aa14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 SENP1Q9P0U3 644 aa14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 CHKBQ9Y259 395 aa14.35□□□□□ -0.11
CYB561A3-216ENST00000540755 MYO15AQ9UKN7 3530 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 VPS13AQ96RL7 3174 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 FZD6O60353 706 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 TULP3O75386 442 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 ECI2O75521 394 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 PIAS1O75925 651 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 PRLP01236 227 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 PSMC3P17980 439 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 POLR2EP19388 210 aaKnown RBP14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 STK19P49842 368 aaPredicted RBP14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 SNRPD1P62314 119 aaKnown RBP14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 TRAF2Q12933 501 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 GALNT3Q14435 633 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 GEN1Q17RS7 908 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 DGKKQ5KSL6 1271 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 ATXN7L2Q5T6C5 722 aaPredicted RBP14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 TMEM215Q68D42 235 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 PDPK2PQ6A1A2 396 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 KIAA0930Q6ICG6 404 aaPredicted RBP14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 C22orf39Q6P5X5 142 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 RASSF3Q86WH2 238 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 UNC5BQ8IZJ1 945 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 PCDH20Q8N6Y1 951 aaKnown RBP14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 OR2AP1Q8NGE2 309 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 MZB1Q8WU39 189 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 PEX13Q92968 403 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 MRRFQ96E11 262 aaKnown RBP14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 RPL10LQ96L21 214 aaKnown RBP14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 ADGRE3Q9BY15 652 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 TM6SF2Q9BZW4 377 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 PPANQ9NQ55 473 aaKnown RBP14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 HPS4Q9NQG7 708 aa14.34□□□□□ -0.11
CYB561A3-216ENST00000540755 MROH6A6NGR9 719 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 SOCS5O75159 536 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 ASLP04424 464 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 KRT15P19012 456 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 PAMP19021 973 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 AVPR2P30518 371 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 HPDP32754 393 aaPredicted RBP14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 SERPINB9P50453 376 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 PTPN5P54829 565 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 SEPT6Q14141 434 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 GAB4Q2WGN9 574 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 TSTD2Q5T7W7 516 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 LGSNQ5TDP6 509 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 KCNMB4Q86W47 210 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 C12orf40Q86WS4 652 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 PLPP6Q8IY26 295 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 YAF2Q8IY57 180 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 UBALD2Q8IYN6 164 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 CPA6Q8N4T0 437 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 BRSK1Q8TDC3 778 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 ZNF778Q96MU6 729 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 PLA2G2FQ9BZM2 168 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 CNOT10Q9H9A5 744 aaKnown RBP14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 ZFATQ9P243 1243 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 LIMD1Q9UGP4 676 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 RIMKLBQ9ULI2 386 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 ERVW-1Q9UQF0 538 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 PCDHGC4Q9Y5F7 938 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 CFAP54Q96N23 3096 aa14.33□□□□□ -0.12
CYB561A3-216ENST00000540755 MUC22E2RYF6 1773 aaPredicted RBP14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 OTOL1A6NHN0 477 aaPredicted RBP14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 SRRM3A6NNA2 597 aaPredicted RBP14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 TRIM24O15164 1050 aa14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 HTRA2O43464 458 aaPredicted RBP14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 KRT37O76014 449 aa14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 SRPRAP08240 638 aaKnown RBP14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 PDHA1P08559 390 aa14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 ERVK-10P10266 1014 aa14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 CNTFP26441 200 aa14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 ARCN1P48444 511 aaKnown RBP14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 GYS2P54840 703 aa14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 RPL26P61254 145 aaKnown RBP14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 RUNX3Q13761 415 aa14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 ESRP1Q6NXG1 681 aaKnown RBP14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 MTSS1LQ765P7 747 aa14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 LPCAT1Q8NF37 534 aa14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 RMDN1Q96DB5 314 aa14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 MTBPQ96DY7 904 aa14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 MYO19Q96H55 970 aa14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 MRGPRX3Q96LB0 322 aa14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 TUBGCP5Q96RT8 1024 aa14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 CPEB1Q9BZB8 566 aaKnown RBP14.32□□□□□ -0.12
CYB561A3-216ENST00000540755 C20orf96Q9NUD7 363 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms