RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 OXNAD1Q96HP4 312 aaPredicted RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 SPACA7Q96KW9 195 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 SPATA13Q96N96 652 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 KLHL32Q96NJ5 620 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 RBM15Q96T37 977 aaKnown RBP eCLIP16.85■□□□□ 0.293e-9■■■■■ 45.2
UBC-208ENST00000540700 DDX47Q9H0S4 455 aaKnown RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 PABPC3Q9H361 631 aaKnown RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 FBRSQ9HAH7 460 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 SCUBE2Q9NQ36 999 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 USP36Q9P275 1121 aaKnown RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 KLHL8Q9P2G9 620 aaPredicted RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 MBD1Q9UIS9 605 aaPredicted RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 ZNF148Q9UQR1 794 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 DRG1Q9Y295 367 aaKnown RBP16.85■□□□□ 0.29
UBC-208ENST00000540700 PCDHGC4Q9Y5F7 938 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 PCNX2A6NKB5 2137 aa16.85■□□□□ 0.29
UBC-208ENST00000540700 A0A1W2PP55 124 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 ESPNB1AK53 854 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 SPINT1O43278 529 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 MTSS1O43312 755 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 ZNF500O60304 480 aaPredicted RBP16.84■□□□□ 0.29
UBC-208ENST00000540700 PHF2O75151 1096 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 URI1O94763 535 aaPredicted RBP16.84■□□□□ 0.29
UBC-208ENST00000540700 METTL18O95568 372 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 MT-CYBP00156 380 aaPredicted RBP16.84■□□□□ 0.29
UBC-208ENST00000540700 ITIH2P19823 946 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 P2RY2P41231 377 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 CD86P42081 329 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 AP1S1P61966 158 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 FAM193AP78312 1265 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 MAP7D1Q3KQU3 841 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 LYSMD4Q5XG99 296 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 GDPD4Q6W3E5 623 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 PID1Q7Z2X4 250 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 PIP4P1Q86T03 277 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 BBS5Q8N3I7 341 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 HDDC3Q8N4P3 179 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 DEFB119Q8N690 84 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 PRCCQ92733 491 aaPredicted RBP16.84■□□□□ 0.29
UBC-208ENST00000540700 FAM131CQ96AQ9 280 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 IMP4Q96G21 291 aaKnown RBP16.84■□□□□ 0.29
UBC-208ENST00000540700 CCDC114Q96M63 670 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 SMIM14Q96QK8 99 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 NAP1L3Q99457 506 aaPredicted RBP16.84■□□□□ 0.29
UBC-208ENST00000540700 MLPHQ9BV36 600 aaPredicted RBP16.84■□□□□ 0.29
UBC-208ENST00000540700 CPEB1Q9BZB8 566 aaKnown RBP16.84■□□□□ 0.29
UBC-208ENST00000540700 SLC25A51Q9H1U9 297 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 GBA3Q9H227 469 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 CDC23Q9UJX2 597 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 NEU2Q9Y3R4 380 aa16.84■□□□□ 0.29
UBC-208ENST00000540700 KIF2AO00139 706 aaPredicted RBP16.83■□□□□ 0.28
UBC-208ENST00000540700 KPNA3O00505 521 aaPredicted RBP16.83■□□□□ 0.28
UBC-208ENST00000540700 HTRA2O43464 458 aaPredicted RBP16.83■□□□□ 0.28
UBC-208ENST00000540700 GCATO75600 419 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 PRNPP04156 253 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 PDHA1P08559 390 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 ITPKAP23677 461 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 PSMB4P28070 264 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 ABL2P42684 1182 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 TPMTP51580 245 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 CNTN1Q12860 1018 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 OLIG2Q13516 323 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 PTPRRQ15256 657 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 LRRC73Q5JTD7 316 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 PIP5KL1Q5T9C9 394 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 FAXCQ5TGI0 409 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 AGBL4Q5VU57 503 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 KDELC1Q6UW63 502 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 PGBD3Q8N328 593 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 TAB3Q8N5C8 712 aaPredicted RBP16.83■□□□□ 0.28
UBC-208ENST00000540700 ECHDC3Q96DC8 303 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 FCRL5Q96RD9 977 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 VAT1Q99536 393 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 SUV39H2Q9H5I1 410 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 ITM2CQ9NQX7 267 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 UBP1Q9NZI7 540 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 RAI2Q9Y5P3 530 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 MRFAP1Q9Y605 127 aa16.83■□□□□ 0.28
UBC-208ENST00000540700 TSPAN11A1L157 253 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 CFAP69A5D8W1 941 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 C1QTNF3-AMACRE9PGA6 284 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 FZD6O60353 706 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 RNASEH1O60930 286 aaKnown RBP16.82■□□□□ 0.28
UBC-208ENST00000540700 ADH1BP00325 375 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 PRLP01236 227 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 IFNB1P01574 187 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 TUBB4AP04350 444 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 PRKCGP05129 697 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 TIMP2P16035 220 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 C5AR1P21730 350 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 ITGB7P26010 798 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 RPL22P35268 128 aaKnown RBP16.82■□□□□ 0.28
UBC-208ENST00000540700 PTGIRP43119 386 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 TAS2R38P59533 333 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 C2orf54Q08AI8 447 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 ZNF805Q5CZA5 627 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 CCDC137Q6PK04 289 aaKnown RBP16.82■□□□□ 0.28
UBC-208ENST00000540700 ZNF572Q7Z3I7 529 aaPredicted RBP16.82■□□□□ 0.28
UBC-208ENST00000540700 DSG4Q86SJ6 1040 aa16.82■□□□□ 0.28
UBC-208ENST00000540700 PROSER1Q86XN7 944 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms