RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 NRP2O60462 931 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 MAFKO60675 156 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 HDCP19113 662 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 CYP2C18P33260 490 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 ADAM17P78536 824 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 RALGDSQ12967 914 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 PPP1R3AQ16821 1122 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 ZNF280DQ6N043 979 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 TAC4Q86UU9 113 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 TMEM86AQ8N2M4 240 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 PBXIP1Q96AQ6 731 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 ZFP42Q96MM3 310 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 TMEM79Q9BSE2 394 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 CYP4F12Q9HCS2 524 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 PREBQ9HCU5 417 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 RSL24D1Q9UHA3 163 aaKnown RBP12.37□□□□□ -0.43
NPC1-202ENST00000540608 CIDEBQ9UHD4 219 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 NEU3Q9UQ49 428 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 MYRFQ9Y2G1 1151 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 SQORQ9Y6N5 450 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 BPTFQ12830 3046 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 TRIP12Q14669 1992 aaPredicted RBP12.37□□□□□ -0.43
NPC1-202ENST00000540608 MRASO14807 208 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 RBP1P09455 135 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 LTA4HP09960 611 aaKnown RBP12.37□□□□□ -0.43
NPC1-202ENST00000540608 ARSAP15289 507 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 MFSD10Q14728 455 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 MTX3Q5HYI7 312 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 C6orf10Q5SRN2 563 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 HMBOX1Q6NT76 420 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 RANBP10Q6VN20 620 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 RNF135Q8IUD6 432 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 ANKFN1Q8N957 763 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 RANBP9Q96S59 729 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 PRKD2Q9BZL6 878 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 TSPYL2Q9H2G4 693 aaPredicted RBP12.37□□□□□ -0.43
NPC1-202ENST00000540608 NOL11Q9H8H0 719 aaKnown RBP12.37□□□□□ -0.43
NPC1-202ENST00000540608 PNPLA3Q9NST1 481 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 OLAHQ9NV23 265 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 ARHGEF38Q9NXL2 777 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 TRAF6Q9Y4K3 522 aa12.37□□□□□ -0.43
NPC1-202ENST00000540608 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.37□□□□□ -0.43
NPC1-202ENST00000540608 FAM155AB1AL88 458 aaPredicted RBP12.36□□□□□ -0.43
NPC1-202ENST00000540608 AURKAO14965 403 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 CDK9P50750 372 aaKnown RBP12.36□□□□□ -0.43
NPC1-202ENST00000540608 TUBA4AP68366 448 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 RBM20Q5T481 1227 aaKnown RBP12.36□□□□□ -0.43
NPC1-202ENST00000540608 CYP2R1Q6VVX0 501 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 ERI1Q8IV48 349 aaKnown RBP12.36□□□□□ -0.43
NPC1-202ENST00000540608 SLC22A9Q8IVM8 553 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 MYO1HQ8N1T3 1032 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 SMARCD1Q96GM5 515 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 OLFM1Q99784 485 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 GALNT8Q9NY28 637 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 CDH9Q9ULB4 789 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 MEIS3P2A8K0S8 358 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 HTRA2O43464 458 aaPredicted RBP12.36□□□□□ -0.43
NPC1-202ENST00000540608 PMPCBO75439 489 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 HSPA8P11142 646 aaKnown RBP12.36□□□□□ -0.43
NPC1-202ENST00000540608 BMP2P12643 396 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 FGFR3P22607 806 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 ACADVLP49748 655 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 ATP4BP51164 291 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 ACAP2Q15057 778 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 SLC14A2Q15849 920 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 PPP4R4Q6NUP7 873 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 LARP4Q71RC2 724 aaKnown RBP eCLIP12.36□□□□□ -0.43
NPC1-202ENST00000540608 PLEKHH3Q7Z736 793 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 DHFR2Q86XF0 187 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 LZTR1Q8N653 840 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 GAB3Q8WWW8 586 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 MRGPRX2Q96LB1 330 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 CIB1Q99828 191 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 FSD1LQ9BXM9 530 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 ANKRD60Q9BZ19 345 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 SLC39A8Q9C0K1 460 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 SIK2Q9H0K1 926 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 CAAP1Q9H8G2 361 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 CSNK1G1Q9HCP0 422 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 ARMC1Q9NVT9 282 aa12.36□□□□□ -0.43
NPC1-202ENST00000540608 CNOT6Q9ULM6 557 aaKnown RBP12.36□□□□□ -0.43
NPC1-202ENST00000540608 TIMM13Q9Y5L4 95 aaPredicted RBP12.36□□□□□ -0.43
NPC1-202ENST00000540608 SRP72O76094 671 aaKnown RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 PYGLP06737 847 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 CCDC166P0CW27 439 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 IMPDH1P20839 514 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 CHRNA4P43681 627 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 LEPRP48357 1165 aaKnown RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 CLCN5P51795 746 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 NHSL2Q5HYW2 709 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 OLFML2BQ68BL8 750 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 KRT80Q6KB66 452 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 ZBTB49Q6ZSB9 765 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 RPS27LQ71UM5 84 aaKnown RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 HM13Q8TCT9 377 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 CALML6Q8TD86 181 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 DQX1Q8TE96 717 aaKnown RBP12.35□□□□□ -0.43
NPC1-202ENST00000540608 LZICQ8WZA0 190 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 TSPAN17Q96FV3 270 aa12.35□□□□□ -0.43
NPC1-202ENST00000540608 UBXN10Q96LJ8 280 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms