RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SMPD1P17405 629 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 GLDCP23378 1020 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 EEF1B2P24534 225 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 SLC9A3P48764 834 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 NUMBP49757 651 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 GDF10P55107 478 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 TNFAIP2Q03169 654 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 ILF2Q12905 390 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 ART3Q13508 389 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 XAF1Q6GPH4 301 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 TRAF7Q6Q0C0 670 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 EPGNQ6UW88 154 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 LINC00299Q6ZSB3 139 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 TFAP2DQ7Z6R9 452 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 MCOLN2Q8IZK6 566 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 PSD4Q8NDX1 1056 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 OR6F1Q8NGZ6 308 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 RP9Q8TA86 221 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 PNPT1Q8TCS8 783 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 SEPT1Q8WYJ6 367 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 FKBP10Q96AY3 582 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 SPATA33Q96N06 139 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 SLITRK1Q96PX8 696 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 OR52B2Q96RD2 323 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 PCYT2Q99447 389 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 MTMR12Q9C0I1 747 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 FBXO8Q9NRD0 319 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 DMAC2Q9NW81 257 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 WDR70Q9NW82 654 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 SFMBT1Q9UHJ3 866 aa9.54□□□□□ -0.88
CTNNA1-243ENST00000540387 A0A0X1KG70 313 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 PCP4L1A6NKN8 68 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 ZNF865P0CJ78 1059 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 BMP2P12643 396 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 FOSL1P15407 271 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 RBL1P28749 1068 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 YWHABP31946 246 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 RPL22P35268 128 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 GABRB2P47870 512 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 C1QTNF8P60827 252 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 PPP3CAQ08209 521 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 BST2Q10589 180 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 TRIM25Q14258 630 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 EPC2Q52LR7 807 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 DESI1Q6ICB0 168 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 SLC16A12Q6ZSM3 486 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 C4orf19Q8IY42 314 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 LGI2Q8N0V4 545 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 AFAP1L2Q8N4X5 818 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 PACRGLQ8N7B6 248 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 TMEM35BQ8NCS4 154 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 MAPK15Q8TD08 544 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 DDX1Q92499 740 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 GLMNQ92990 594 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 SLC39A13Q96H72 371 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 GPR20Q99678 358 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 FUNDC2Q9BWH2 189 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 SLA2Q9H6Q3 261 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 ABCB10Q9NRK6 738 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 COMMD8Q9NX08 183 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 ADA2Q9NZK5 511 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 SEPT10Q9P0V9 454 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 TEX264Q9Y6I9 313 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 HTTP42858 3142 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 B4GAT1O43505 415 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 UGT2B11O75310 529 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 AVILO75366 819 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 LYPLA2O95372 231 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 CALCAP01258 141 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 IGHA2P01877 340 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 AMHP03971 560 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 DBTP11182 482 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 ICAM2P13598 275 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 GCLMP48507 274 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 AP2S1P53680 142 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 ARHGAP1Q07960 439 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 CETN1Q12798 172 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 PPP1R3AQ16821 1122 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 MROH9Q5TGP6 573 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 GATAD2AQ86YP4 633 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 CAMK1DQ8IU85 385 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 EPHX4Q8IUS5 362 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 LYSMD2Q8IV50 215 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 RCOR2Q8IZ40 523 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 POC5Q8NA72 575 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 TP53I13Q8NBR0 393 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 PSMA8Q8TAA3 256 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 ZNF296Q8WUU4 475 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 SEPT8Q92599 483 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 APBB2Q92870 758 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 FERD3LQ96RJ6 166 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 TMEM206Q9H813 350 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 ZNF302Q9NR11 478 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 AGPAT3Q9NRZ7 376 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 RAB20Q9NX57 234 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 WARS2Q9UGM6 360 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 DNMT3LQ9UJW3 386 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 EMCNQ9ULC0 261 aa9.53□□□□□ -0.88
CTNNA1-243ENST00000540387 MYH9P35579 1960 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms