RNA–Protein interactions for RNA: ENST00000540103.1

NPIPB4-212, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-212ENST00000540103 HCAR2Q8TDS4 363 aa8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 HNRNPLLQ8WVV9 542 aaKnown RBP8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 CASKIN2Q8WXE0 1202 aa8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 ZNF592Q92610 1267 aa8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 PEBP4Q96S96 227 aa8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 NCAPGQ9BPX3 1015 aa8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 CPEB1Q9BZB8 566 aaKnown RBP8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 LACRTQ9GZZ8 138 aa8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 ZDHHC6Q9H6R6 413 aa8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 TRIM10Q9UDY6 481 aa8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 TFR2Q9UP52 801 aa8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 ITM2BQ9Y287 266 aa8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 CSNK1G3Q9Y6M4 447 aa8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 SHROOM3Q8TF72 1996 aa8.09□□□□□ -1.11
NPIPB4-212ENST00000540103 KIF26BQ2KJY2 2108 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 TSPAN11A1L157 253 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 CTAGE9A4FU28 777 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 RCCD1A6NED2 376 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 TMEM191CA6NGB0 347 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 J3KR12 359 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 PALMO75781 387 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 NEBLO76041 1014 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 MT-CO3P00414 261 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 TNNT1P13805 278 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 NME1P15531 152 aaKnown RBP8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 EPHB2P29323 1055 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 IGFALSP35858 605 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 SLC1A1P43005 524 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 RGRP47804 291 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 AIF1P55008 147 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 GEMIN4P57678 1058 aaKnown RBP8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 E2F1Q01094 437 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 PIGHQ14442 188 aaPredicted RBP8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 AGERQ15109 404 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 HADHQ16836 314 aaKnown RBP8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 TMEM52BQ4KMG9 183 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 EFHC2Q5JST6 749 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 C11orf63Q6NUN7 778 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 SCYL2Q6P3W7 929 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 GDPD4Q6W3E5 623 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 PEX26Q7Z412 305 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 PDZD3Q86UT5 571 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 ZSWIM9Q86XI8 627 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 ARHGAP12Q8IWW6 846 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 UBL4BQ8N7F7 174 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 TP53I13Q8NBR0 393 aaPredicted RBP8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 DENND6BQ8NEG7 585 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 FNIP1Q8TF40 1166 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 UBE2Q2Q8WVN8 375 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 FUBP1Q96AE4 644 aaKnown RBP8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 ARHGEF26Q96DR7 871 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 CRELD1Q96HD1 420 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 APOLD1Q96LR9 279 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 BBC3Q96PG8 261 aaPredicted RBP8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 CALN1Q9BXU9 219 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 OSBPL1AQ9BXW6 950 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 TRIM7Q9C029 511 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 SLC39A8Q9C0K1 460 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 TCEAL2Q9H3H9 227 aaPredicted RBP8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 MBNL1Q9NR56 388 aaKnown RBP8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 GPATCH2LQ9NWQ4 482 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 NLGN3Q9NZ94 848 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 AMFRQ9UKV5 643 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 HPCAL4Q9UM19 191 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 DUSP10Q9Y6W6 482 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 PTPRQQ9UMZ3 2332 aa8.08□□□□□ -1.12
NPIPB4-212ENST00000540103 NBEAQ8NFP9 2946 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 A0A1W2PNU3 283 aaPredicted RBP8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 KRIT1O00522 736 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 TPP1O14773 563 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 CREB3O43889 395 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 ZNF500O60304 480 aaPredicted RBP8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 OPA1O60313 960 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 PRAMEF11O60813 436 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 MMP20O60882 483 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 GCATO75600 419 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 MTA2O94776 668 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 GM2AP17900 193 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 HTR7P34969 479 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 EIF2S3P41091 472 aaKnown RBP8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 RABIFP47224 123 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 CSNK1DP48730 415 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 HCAR3P49019 387 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 PAPOLAP51003 745 aaKnown RBP8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 NDST2P52849 883 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 HADHBP55084 474 aaKnown RBP8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 HNRNPKP61978 463 aaKnown RBP eCLIP8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 ACAP1Q15027 740 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 TCEAL1Q15170 157 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 WSCD2Q2TBF2 565 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 PARP15Q460N3 678 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 LRRC73Q5JTD7 316 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 ERMARDQ5T6L9 678 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 SYT10Q6XYQ8 523 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 NYAP1Q6ZVC0 841 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 TTC7BQ86TV6 843 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 TP53INP2Q8IXH6 220 aa8.07□□□□□ -1.12
NPIPB4-212ENST00000540103 SLC35F6Q8N357 371 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms