RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 ARL4CP56559 192 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 WNT3AP56704 352 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 SKOR1P84550 965 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 IFFO1Q0D2I5 559 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 MESP2Q0VG99 397 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 CST6Q15828 149 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 PCSK7Q16549 785 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 DNAJC21Q5F1R6 531 aaKnown RBP10.31□□□□□ -0.76
CLPB-210ENST00000539148 ARSIQ5FYB1 569 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 DENND2CQ68D51 928 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 NAIF1Q69YI7 327 aaPredicted RBP10.31□□□□□ -0.76
CLPB-210ENST00000539148 ZNF771Q7L3S4 317 aaPredicted RBP10.31□□□□□ -0.76
CLPB-210ENST00000539148 NLRP9Q7RTR0 991 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 TMPRSS6Q8IU80 811 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 CCNJLQ8IV13 435 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 STK40Q8N2I9 435 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 PGBD5Q8N414 524 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.31□□□□□ -0.76
CLPB-210ENST00000539148 PDCD7Q8N8D1 485 aaKnown RBP10.31□□□□□ -0.76
CLPB-210ENST00000539148 IPMKQ8NFU5 416 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 GRIN3AQ8TCU5 1115 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 LRRN4Q8WUT4 740 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 PBXIP1Q96AQ6 731 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 LRRC39Q96DD0 335 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 ATP6V1G3Q96LB4 118 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 TTC25Q96NG3 672 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 KLHL32Q96NJ5 620 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 NECAB3Q96P71 396 aaPredicted RBP10.31□□□□□ -0.76
CLPB-210ENST00000539148 ZIM3Q96PE6 472 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 MLPHQ9BV36 600 aaPredicted RBP10.31□□□□□ -0.76
CLPB-210ENST00000539148 TDRD1Q9BXT4 1180 aaKnown RBP10.31□□□□□ -0.76
CLPB-210ENST00000539148 HDAC8Q9BY41 377 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 TRIM31Q9BZY9 425 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 FOXQ1Q9C009 403 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 KDM4CQ9H3R0 1056 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 CNOT10Q9H9A5 744 aaKnown RBP10.31□□□□□ -0.76
CLPB-210ENST00000539148 ZDHHC4Q9NPG8 344 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 RAD18Q9NS91 495 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 ZDHHC18Q9NUE0 388 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 SAMD15Q9P1V8 674 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 RAPGEFL1Q9UHV5 662 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 PPM1HQ9ULR3 514 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 FZD4Q9ULV1 537 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 NEU2Q9Y3R4 380 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 PCDHB9Q9Y5E1 797 aa10.31□□□□□ -0.76
CLPB-210ENST00000539148 CCDC163A0A0D9SF12 145 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 TCRBV21S2A2A0A5A6 115 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 ESYT3A0FGR9 886 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 H3BQF6 201 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 NEMP1O14524 444 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 EIF3HO15372 352 aaKnown RBP eCLIP10.3□□□□□ -0.76
CLPB-210ENST00000539148 HTRA2O43464 458 aaPredicted RBP10.3□□□□□ -0.76
CLPB-210ENST00000539148 LAMTOR5O43504 91 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 ZNF821O75541 412 aaPredicted RBP10.3□□□□□ -0.76
CLPB-210ENST00000539148 PGLSO95336 258 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 PAPSS2O95340 614 aaPredicted RBP10.3□□□□□ -0.76
CLPB-210ENST00000539148 METTL18O95568 372 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 ZSCAN5DPP0CG00 497 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 ZNF30P17039 623 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 ECHS1P30084 290 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 SLC8A1P32418 973 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 PSMD8P48556 350 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 NUBP1P53384 320 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 PMS2P54278 862 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 PLTPP55058 493 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 SATB1Q01826 763 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 NIPAL4Q0D2K0 466 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 ARHGEF7Q14155 803 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 HIF1AQ16665 826 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 ZDHHC20Q5W0Z9 365 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 CENPUQ71F23 418 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 ERN2Q76MJ5 926 aaKnown RBP10.3□□□□□ -0.76
CLPB-210ENST00000539148 TTC7BQ86TV6 843 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 PRPF39Q86UA1 669 aaKnown RBP10.3□□□□□ -0.76
CLPB-210ENST00000539148 C11orf74Q86VG3 221 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 MMAAQ8IVH4 418 aaKnown RBP10.3□□□□□ -0.76
CLPB-210ENST00000539148 KLHDC8BQ8IXV7 354 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 RAVER1Q8IY67 606 aaKnown RBP10.3□□□□□ -0.76
CLPB-210ENST00000539148 ZNF687Q8N1G0 1237 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 FBXL6Q8N531 539 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 PTCD2Q8WV60 388 aaKnown RBP10.3□□□□□ -0.76
CLPB-210ENST00000539148 EZH1Q92800 747 aaPredicted RBP10.3□□□□□ -0.76
CLPB-210ENST00000539148 TADA1Q96BN2 335 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 ECHDC3Q96DC8 303 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 PGM2Q96G03 612 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 SPACA7Q96KW9 195 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 ACOX2Q99424 681 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 C19orf43Q9BQ61 176 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 TRIM51Q9BSJ1 452 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 FAM126AQ9BYI3 521 aaPredicted RBP10.3□□□□□ -0.76
CLPB-210ENST00000539148 TXLNGYQ9BZA5 131 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 IL22Q9GZX6 179 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 CDH19Q9H159 772 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 ARNT2Q9HBZ2 717 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 SPATA6Q9NWH7 488 aaPredicted RBP10.3□□□□□ -0.76
CLPB-210ENST00000539148 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.3□□□□□ -0.76
CLPB-210ENST00000539148 PLAAQ9Y263 795 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 PCDHGC4Q9Y5F7 938 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 WASF2Q9Y6W5 498 aa10.3□□□□□ -0.76
CLPB-210ENST00000539148 MUC6Q6W4X9 2439 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms