RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 SLCO1B7G3V0H7 640 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 H3BNC9 293 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 ACSL4O60488 711 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 CCNT2O60583 730 aaKnown RBP14.09□□□□□ -0.15
LIMK1-208ENST00000538333 CIB2O75838 187 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 EPOP01588 193 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 JUNP05412 331 aaKnown RBP14.09□□□□□ -0.15
LIMK1-208ENST00000538333 COX4I1P13073 169 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 HLA-DPA1P20036 260 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 ATP5F1P24539 256 aaPredicted RBP14.09□□□□□ -0.15
LIMK1-208ENST00000538333 EPHA3P29320 983 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 PFKPQ01813 784 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 FAM83EQ2M2I3 478 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 FAM43BQ6ZT52 329 aaPredicted RBP14.09□□□□□ -0.15
LIMK1-208ENST00000538333 PIWIL4Q7Z3Z4 852 aaKnown RBP14.09□□□□□ -0.15
LIMK1-208ENST00000538333 LMNTD2Q8IXW0 634 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 MAB21L3Q8N8X9 362 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 DTX3LQ8TDB6 740 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 ACTRT2Q8TDY3 377 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 PEX13Q92968 403 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 CEP295NLQ96MC4 621 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 CDK5RAP1Q96SZ6 601 aaKnown RBP14.09□□□□□ -0.15
LIMK1-208ENST00000538333 LBHD1Q9BQE6 289 aaPredicted RBP14.09□□□□□ -0.15
LIMK1-208ENST00000538333 NUF2Q9BZD4 464 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 POMKQ9H5K3 350 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 MTRRQ9UBK8 725 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 DNMT3LQ9UJW3 386 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 LOC100653049A0A140TA62 436 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 NEMP2A6NFY4 417 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 KRT34O76011 436 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 FGF1P05230 155 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 ITGAXP20702 1163 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 KCNA5P22460 613 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 ATP5C1P36542 298 aaKnown RBP14.09□□□□□ -0.15
LIMK1-208ENST00000538333 VHLP40337 213 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 SESN3P58005 492 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 PRAMEP78395 509 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 PEX6Q13608 980 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 ZNF235Q14590 738 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 CCDC6Q16204 474 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 AGAP9Q5VTM2 703 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 LDB1Q86U70 411 aaPredicted RBP14.09□□□□□ -0.15
LIMK1-208ENST00000538333 OR6P1Q8NGX9 317 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 SGF29Q96ES7 293 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 TSPAN17Q96FV3 270 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 LENG8Q96PV6 779 aaPredicted RBP14.09□□□□□ -0.15
LIMK1-208ENST00000538333 MGME1Q9BQP7 344 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 MAGEH1Q9H213 219 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 NMRK1Q9NWW6 199 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 NCKIPSDQ9NZQ3 722 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 VWA7Q9Y334 891 aa14.09□□□□□ -0.15
LIMK1-208ENST00000538333 NEMP1O14524 444 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 GJB5O95377 273 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 LTA4HP09960 611 aaKnown RBP14.08□□□□□ -0.16
LIMK1-208ENST00000538333 CCDC166P0CW27 439 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 CD1EP15812 388 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 SERPINB5P36952 375 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 CDKN2DP55273 166 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 GNA12Q03113 381 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 C6orf163Q5TEZ5 329 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 C1orf146Q5VVC0 180 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 TMEM207Q6UWW9 146 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 TRIM67Q6ZTA4 783 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 RNF168Q8IYW5 571 aaPredicted RBP14.08□□□□□ -0.16
LIMK1-208ENST00000538333 LRRC43Q8N309 656 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 CPSF7Q8N684 471 aaKnown RBP14.08□□□□□ -0.16
LIMK1-208ENST00000538333 CCNYL1Q8N7R7 359 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 OR7D4Q8NG98 312 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 ANKRD49Q8WVL7 239 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 ZNF333Q96JL9 665 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 TBATAQ96M53 351 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 PRICKLE1Q96MT3 831 aaPredicted RBP14.08□□□□□ -0.16
LIMK1-208ENST00000538333 TRIB3Q96RU7 358 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 VN1R3Q9BXE9 311 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 RETREG1Q9H6L5 497 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 GPAMQ9HCL2 828 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.08□□□□□ -0.16
LIMK1-208ENST00000538333 SSX2IPQ9Y2D8 614 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 ACTL7AQ9Y615 435 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 ARL5AQ9Y689 179 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 WASF2Q9Y6W5 498 aa14.08□□□□□ -0.16
LIMK1-208ENST00000538333 ZNF840PA6NDX5 716 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 ZMPSTE24O75844 475 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 SNUPNO95149 360 aaKnown RBP14.07□□□□□ -0.16
LIMK1-208ENST00000538333 RPL17P18621 184 aaKnown RBP14.07□□□□□ -0.16
LIMK1-208ENST00000538333 ATP6V1C1P21283 382 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 KLHDC10Q6PID8 442 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 LRRC74BQ6ZQY2 392 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 BRSK1Q8TDC3 778 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 OVCA2Q8WZ82 227 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 IFT43Q96FT9 208 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 SCLYQ96I15 445 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 MAELQ96JY0 434 aaKnown RBP14.07□□□□□ -0.16
LIMK1-208ENST00000538333 DNAJC1Q96KC8 554 aaKnown RBP14.07□□□□□ -0.16
LIMK1-208ENST00000538333 PPP1R36Q96LQ0 422 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 NSMCE3Q96MG7 304 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 RTKNQ9BST9 563 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 CCDC28BQ9BUN5 200 aa14.07□□□□□ -0.16
LIMK1-208ENST00000538333 SUDS3Q9H7L9 328 aaPredicted RBP14.07□□□□□ -0.16
LIMK1-208ENST00000538333 CDH22Q9UJ99 828 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms