RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 DHDDSQ86SQ9 333 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.7□□□□□ -0.7
CLIP1-209ENST00000537178 DNAJB14Q8TBM8 379 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 TEX47Q8TBZ9 253 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 CLCC1Q96S66 551 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 ZNF607Q96SK3 696 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 OSBPL11Q9BXB4 747 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 EXO5Q9H790 373 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 CHST7Q9NS84 486 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 MAP10Q9P2G4 905 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 OR12D3Q9UGF7 316 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 RPL26L1Q9UNX3 145 aaKnown RBP10.7□□□□□ -0.7
CLIP1-209ENST00000537178 C2CD2Q9Y426 696 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 TBC1D3BA6NDS4 549 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 LACTBL1A8MY62 500 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 SLC25A3Q00325 362 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 PGM5Q15124 567 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 LSM12Q3MHD2 195 aaKnown RBP10.7□□□□□ -0.7
CLIP1-209ENST00000537178 HYIQ5T013 277 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 ATG14Q6ZNE5 492 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 METTL3Q86U44 580 aaKnown RBP10.7□□□□□ -0.7
CLIP1-209ENST00000537178 KIAA0895Q8NCT3 520 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 ZDHHC6Q9H6R6 413 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLIP1-209ENST00000537178 VPS4AQ9UN37 437 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 KCNE2Q9Y6J6 123 aa10.7□□□□□ -0.7
CLIP1-209ENST00000537178 MYH1P12882 1939 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 A0A0X1KG70 313 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 IRGMA1A4Y4 181 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 DHFRP00374 187 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 RPA3P35244 121 aaPredicted RBP10.69□□□□□ -0.7
CLIP1-209ENST00000537178 AKR1D1P51857 326 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 CDH8P55286 799 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 OLR1P78380 273 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 SLC39A12Q504Y0 691 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 TXNDC11Q6PKC3 985 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 BAP1Q92560 729 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 HSFY1Q96LI6 401 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 TCF12Q99081 682 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 MRPL57Q9BQC6 102 aaKnown RBP10.69□□□□□ -0.7
CLIP1-209ENST00000537178 ABHD16BQ9H3Z7 469 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 ADARB2Q9NS39 739 aaKnown RBP10.69□□□□□ -0.7
CLIP1-209ENST00000537178 ST3GAL5Q9UNP4 418 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 RAP2CQ9Y3L5 183 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 MFHAS1Q9Y4C4 1052 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 PCDHGC5Q9Y5F6 944 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 ZNF879B4DU55 563 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 H3BNH8 94 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 MDM4O15151 490 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 CBFA2T3O75081 653 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 GNRH1P01148 92 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 FTH1P02794 183 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 S100A6P06703 90 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 BDNFP23560 247 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 MARSP56192 900 aaKnown RBP10.69□□□□□ -0.7
CLIP1-209ENST00000537178 ATP6V0D1P61421 351 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 LYPLAL1Q5VWZ2 237 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 RNF43Q68DV7 783 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 TAPT1Q6NXT6 567 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 GPRIN3Q6ZVF9 776 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 SMIM5Q71RC9 77 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 YTHDF3Q7Z739 585 aaKnown RBP10.69□□□□□ -0.7
CLIP1-209ENST00000537178 PJA1Q8NG27 643 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 OR52K1Q8NGK4 314 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 ZNF354BQ96LW1 612 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 OMDQ99983 421 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 GBA2Q9HCG7 927 aaPredicted RBP10.69□□□□□ -0.7
CLIP1-209ENST00000537178 FRMPD4Q14CM0 1322 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 CNTNAP4Q9C0A0 1308 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 GTPBP1O00178 669 aaKnown RBP10.69□□□□□ -0.7
CLIP1-209ENST00000537178 MAGEC1O60732 1142 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 OR5F1O95221 314 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 CST1P01037 141 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 IFNGP01579 166 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 USP17L7P0C7H9 530 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 CCNYL3P0C7X3 344 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 HGFP14210 728 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 PSMB4P28070 264 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 GPR1P46091 355 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 LSM3P62310 102 aaKnown RBP10.69□□□□□ -0.7
CLIP1-209ENST00000537178 HKDC1Q2TB90 917 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 AP5B1Q2VPB7 878 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 SAPCD2Q86UD0 394 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 DNAAF5Q86Y56 855 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 LINC00116Q8NCU8 138 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 RDH11Q8TC12 318 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 NEK7Q8TDX7 302 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 AK5Q9Y6K8 562 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 C1QTNF3-AMACRE9PGA6 284 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 ADCY6O43306 1168 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 AVILO75366 819 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 TRUB2O95900 331 aaKnown RBP10.69□□□□□ -0.7
CLIP1-209ENST00000537178 AMHP03971 560 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 ABHD2P08910 425 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 CSH1P0DML2 217 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 CSH2P0DML3 217 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 MYBL2P10244 700 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 MNDAP41218 407 aa10.69□□□□□ -0.7
CLIP1-209ENST00000537178 RPL38P63173 70 aaKnown RBP10.69□□□□□ -0.7
CLIP1-209ENST00000537178 MAP4K3Q8IVH8 894 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms