RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 SGK2Q9HBY8 427 aa7.2□□□□□ -1.26
YBX3-206ENST00000536823 FSCN3Q9NQT6 498 aa7.2□□□□□ -1.26
YBX3-206ENST00000536823 SEPT11Q9NVA2 429 aaKnown RBP7.2□□□□□ -1.26
YBX3-206ENST00000536823 ADAM22Q9P0K1 906 aa7.2□□□□□ -1.26
YBX3-206ENST00000536823 ZNF212Q9UDV6 495 aa7.2□□□□□ -1.26
YBX3-206ENST00000536823 SLC25A13Q9UJS0 675 aa7.2□□□□□ -1.26
YBX3-206ENST00000536823 VPS28Q9UK41 221 aa7.2□□□□□ -1.26
YBX3-206ENST00000536823 KNTC1P50748 2209 aa7.2□□□□□ -1.26
YBX3-206ENST00000536823 ACACAQ13085 2346 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 AKAP13Q12802 2813 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 A0A1W2PQC6 194 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 TCRBV5S1A1TA0A578 114 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 SYCE3A1L190 88 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 DRGXA6NNA5 263 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 UPK3BL1B0FP48 263 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 UPK3BL2E5RIL1 263 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 ALOX15BO15296 676 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 BCAT2O15382 392 aaPredicted RBP7.19□□□□□ -1.26
YBX3-206ENST00000536823 SNAP91O60641 907 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 KCNK5O95279 499 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 CCDC172P0C7W6 258 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 KRT3P12035 628 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 VAV1P15498 845 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 PTMSP20962 102 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 CSRP1P21291 193 aaKnown RBP7.19□□□□□ -1.26
YBX3-206ENST00000536823 ADRA1BP35368 520 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 NOVA1P51513 510 aaKnown RBP7.19□□□□□ -1.26
YBX3-206ENST00000536823 ATXN3P54252 364 aaPredicted RBP7.19□□□□□ -1.26
YBX3-206ENST00000536823 KRT83P78385 493 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 GRIK2Q13002 908 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 COL9A2Q14055 689 aaPredicted RBP7.19□□□□□ -1.26
YBX3-206ENST00000536823 CDO1Q16878 200 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 UAP1L1Q3KQV9 507 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 CCDC14Q49A88 953 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 RAB6CQ53S08 254 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 E4F1Q66K89 784 aaPredicted RBP7.19□□□□□ -1.26
YBX3-206ENST00000536823 DNAJC24Q6P3W2 148 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 LRSAM1Q6UWE0 723 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 ZNF783Q6ZMS7 281 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 FAM214BQ7L5A3 538 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 IRF2BP2Q7Z5L9 587 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 DSG4Q86SJ6 1040 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 PHLDB2Q86SQ0 1253 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 MMAAQ8IVH4 418 aaKnown RBP7.19□□□□□ -1.26
YBX3-206ENST00000536823 SLITRK4Q8IW52 837 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 SH2D3CQ8N5H7 860 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 MINDY1Q8N5J2 469 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 GANCQ8TET4 914 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 FAM172AQ8WUF8 416 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 SNX19Q92543 992 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 CENPIQ92674 756 aaPredicted RBP7.19□□□□□ -1.26
YBX3-206ENST00000536823 PTPRN2Q92932 1015 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 SEC16BQ96JE7 1060 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 SELENOOQ9BVL4 669 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 GTPBP2Q9BX10 602 aaKnown RBP7.19□□□□□ -1.26
YBX3-206ENST00000536823 RAB6CQ9H0N0 254 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 CBX8Q9HC52 389 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 FBXL12Q9NXK8 326 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 MPP6Q9NZW5 540 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 PPARGC1AQ9UBK2 798 aaKnown RBP7.19□□□□□ -1.26
YBX3-206ENST00000536823 SERGEFQ9UGK8 458 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 EIF2B4Q9UI10 523 aaKnown RBP7.19□□□□□ -1.26
YBX3-206ENST00000536823 VPS51Q9UID3 782 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 FZD4Q9ULV1 537 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 NEU3Q9UQ49 428 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 HS3ST2Q9Y278 367 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 NCKAP1Q9Y2A7 1128 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.19□□□□□ -1.26
YBX3-206ENST00000536823 ZZEF1O43149 2961 aa7.19□□□□□ -1.26
YBX3-206ENST00000536823 FREM2Q5SZK8 3169 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 ILVBLA1L0T0 632 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 LRRC53A6NM62 1247 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 SIGLEC16A6NMB1 481 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 C10orf142B7Z368 130 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 C1QTNF3-AMACRE9PGA6 284 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 CCP110O43303 1012 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 OPHN1O60890 802 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 GJB3O75712 270 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 RNASEH2AO75792 299 aaKnown RBP7.18□□□□□ -1.26
YBX3-206ENST00000536823 IGHV4-34P06331 123 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 SRCP12931 536 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 GOT1P17174 413 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 ATF4P18848 351 aaPredicted RBP7.18□□□□□ -1.26
YBX3-206ENST00000536823 GPD1P21695 349 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 C5AR1P21730 350 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 CD27P26842 260 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 PMLP29590 882 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 OR1E1P30953 314 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 SLC8A1P32418 973 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 RFC1P35251 1148 aaPredicted RBP7.18□□□□□ -1.26
YBX3-206ENST00000536823 DRD3P35462 400 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 PRKCIP41743 596 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 AFF3P51826 1226 aaKnown RBP7.18□□□□□ -1.26
YBX3-206ENST00000536823 METAP1P53582 386 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 GALCP54803 685 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 ADPRHP54922 357 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 HDAC4P56524 1084 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 BNC1Q01954 994 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 SCAPQ12770 1279 aa7.18□□□□□ -1.26
YBX3-206ENST00000536823 SEMA3BQ13214 749 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms