RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 MMP12P39900 470 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 MAPK8P45983 427 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 CCR5P51681 352 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 CLDN2P57739 230 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 SKOR1P84550 965 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 BNC1Q01954 994 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 GALNT3Q14435 633 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 GRM3Q14832 879 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 CSRP2Q16527 193 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 PCSK7Q16549 785 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 UGP2Q16851 508 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 PRPF39Q86UA1 669 aaKnown RBP14.12□□□□□ -0.15
VPS11-205ENST00000534551 SLC13A5Q86YT5 568 aaPredicted RBP14.12□□□□□ -0.15
VPS11-205ENST00000534551 HTR3CQ8WXA8 447 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 SERAC1Q96JX3 654 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 ZNF641Q96N77 438 aaPredicted RBP14.12□□□□□ -0.15
VPS11-205ENST00000534551 GORASP1Q9BQQ3 440 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 EDEM2Q9BV94 578 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 TDRD1Q9BXT4 1180 aaKnown RBP14.12□□□□□ -0.15
VPS11-205ENST00000534551 CARD9Q9H257 536 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 KDM4CQ9H3R0 1056 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 CAPN10Q9HC96 672 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 VPS45Q9NRW7 570 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 SMARCAL1Q9NZC9 954 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 UBP1Q9NZI7 540 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 KLHL8Q9P2G9 620 aaPredicted RBP14.12□□□□□ -0.15
VPS11-205ENST00000534551 B4GALT6Q9UBX8 382 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 DNPEPQ9ULA0 475 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 CHKBQ9Y259 395 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 PCDHB9Q9Y5E1 797 aa14.12□□□□□ -0.15
VPS11-205ENST00000534551 ASCC3Q8N3C0 2202 aaKnown RBP14.12□□□□□ -0.15
VPS11-205ENST00000534551 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.11□□□□□ -0.15
VPS11-205ENST00000534551 A0A1B0GVT2 93 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 NPIPB15A6NHN6 443 aaPredicted RBP14.11□□□□□ -0.15
VPS11-205ENST00000534551 RIOK3O14730 519 aaKnown RBP14.11□□□□□ -0.15
VPS11-205ENST00000534551 KCNN4O15554 427 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 ZSCAN12O43309 604 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 MMP20O60882 483 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 ZNF806P0C7X5 589 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 LHCGRP22888 699 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 CETN2P41208 172 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 CSNK1EP49674 416 aaKnown RBP14.11□□□□□ -0.15
VPS11-205ENST00000534551 GDF10P55107 478 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 FAM193AP78312 1265 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 GRIK2Q13002 908 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 SIX1Q15475 284 aaPredicted RBP14.11□□□□□ -0.15
VPS11-205ENST00000534551 DUOXA1Q1HG43 343 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 AASDHQ4L235 1098 aaPredicted RBP14.11□□□□□ -0.15
VPS11-205ENST00000534551 TEX44Q53QW1 395 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 BRAT1Q6PJG6 821 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 TSPAN33Q86UF1 283 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 CDKL3Q8IVW4 592 aaPredicted RBP14.11□□□□□ -0.15
VPS11-205ENST00000534551 C12orf50Q8NA57 414 aaPredicted RBP14.11□□□□□ -0.15
VPS11-205ENST00000534551 LPCAT1Q8NF37 534 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 CCDC110Q8TBZ0 833 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 TEKT5Q96M29 485 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 GLOD4Q9HC38 313 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 AASDHPPTQ9NRN7 309 aa14.11□□□□□ -0.15
VPS11-205ENST00000534551 ZNF106Q9H2Y7 1883 aaKnown RBP14.1□□□□□ -0.15
VPS11-205ENST00000534551 CEP250Q9BV73 2442 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 A0A1B0GTW7 788 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 HACD1B0YJ81 288 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 KHNYNO15037 678 aaKnown RBP14.1□□□□□ -0.15
VPS11-205ENST00000534551 FANCGO15287 622 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 FZD6O60353 706 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 LRP3O75074 770 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 PRLP01236 227 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 C6P13671 934 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 ENGP17813 658 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 GM2AP17900 193 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 XRCC4Q13426 336 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 OLIG2Q13516 323 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 SNX1Q13596 522 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 CNGA3Q16281 694 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 SETMARQ53H47 684 aaPredicted RBP14.1□□□□□ -0.15
VPS11-205ENST00000534551 ARMC12Q5T9G4 340 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 NAPEPLDQ6IQ20 393 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 KIAA1161Q6NSJ0 714 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 DARS2Q6PI48 645 aaKnown RBP14.1□□□□□ -0.15
VPS11-205ENST00000534551 SLC23A3Q6PIS1 610 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 GCNT7Q6ZNI0 430 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 BZW1Q7L1Q6 419 aaKnown RBP14.1□□□□□ -0.15
VPS11-205ENST00000534551 KDELC2Q7Z4H8 507 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 PRUNE1Q86TP1 453 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 SLC35B2Q8TB61 432 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 CXorf40AQ8TE69 158 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 PIH1D2Q8WWB5 315 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 C1orf54Q8WWF1 131 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 RAB7BQ96AH8 199 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 IMP4Q96G21 291 aaKnown RBP14.1□□□□□ -0.15
VPS11-205ENST00000534551 OXNAD1Q96HP4 312 aaPredicted RBP14.1□□□□□ -0.15
VPS11-205ENST00000534551 MS4A14Q96JA4 679 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 GTPBP2Q9BX10 602 aaKnown RBP14.1□□□□□ -0.15
VPS11-205ENST00000534551 AMACRQ9UHK6 382 aa14.1□□□□□ -0.15
VPS11-205ENST00000534551 BPTFQ12830 3046 aa14.09□□□□□ -0.15
VPS11-205ENST00000534551 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.09□□□□□ -0.15
VPS11-205ENST00000534551 A0A1W2PR77 199 aa14.09□□□□□ -0.15
VPS11-205ENST00000534551 GOLGA6L9A6NEM1 432 aa14.09□□□□□ -0.15
VPS11-205ENST00000534551 TSPAN6O43657 245 aa14.09□□□□□ -0.15
VPS11-205ENST00000534551 CEP104O60308 925 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms