RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	RAB11FIP2	Q7L804	512 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MAVS	Q7Z434	540 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SERINC5	Q86VE9	423 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MINDY1	Q8N5J2	469 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ZNF248	Q8NDW4	579 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	OR6Y1	Q8NGX8	325 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	IL17D	Q8TAD2	202 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	KAT2B	Q92831	832 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MAEL	Q96JY0	434 aa	Known RBP	4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	KLC2	Q9H0B6	622 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	DEF6	Q9H4E7	631 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SEPSECS	Q9HD40	501 aa	Known RBP	4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	NRCAM	Q92823	1304 aa		4.88	□□□□□ -1.63
ECHDC1-223	ENST00000534442	NSD1	Q96L73	2696 aa	Predicted RBP	4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ARHGAP10	A1A4S6	786 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	UNC119B	A6NIH7	251 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442		E7EVH7	732 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	EPB41L2	O43491	1005 aa	Known RBP	4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	RHOBTB3	O94955	611 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SPDEF	O95238	335 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	IGKV5-2	P06315	115 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	GHR	P10912	638 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TNFAIP3	P21580	790 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CSTF2	P33240	577 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ACTN2	P35609	894 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	DDIT3	P35638	169 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PBX3	P40426	434 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	DHPS	P49366	369 aa	Predicted RBP	4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	AARS	P49588	968 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CCR5	P51681	352 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ACTR2	P61160	394 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	LMOD3	Q0VAK6	560 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	DDX10	Q13206	875 aa	Known RBP	4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	KARS	Q15046	597 aa	Known RBP	4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PRKD1	Q15139	912 aa	Predicted RBP	4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	KRT24	Q2M2I5	525 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TMEM196	Q5HYL7	178 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ARMC6	Q6NXE6	501 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PIK3AP1	Q6ZUJ8	805 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MTSS1L	Q765P7	747 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	DZIP1	Q86YF9	867 aa	Known RBP	4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	FSTL5	Q8N475	847 aa	Predicted RBP	4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ESX1	Q8N693	406 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SSH3	Q8TE77	659 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	WDR60	Q8WVS4	1066 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MYEOV	Q96EZ4	313 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	FAM20A	Q96MK3	541 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	COG8	Q96MW5	612 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MECR	Q9BV79	373 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ZCWPW1	Q9H0M4	648 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ELAC1	Q9H777	363 aa	Known RBP	4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	WASH6P	Q9NQA3	447 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	G6PC2	Q9NQR9	355 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	BABAM1	Q9NWV8	329 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TCAF1	Q9Y4C2	921 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	WNT6	Q9Y6F9	365 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	COL1A2	P08123	1366 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CACNA1F	O60840	1977 aa		4.87	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ANK2	Q01484	3957 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	VPS13C	Q709C8	3753 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442		K7ENP7	123 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	KLK10	O43240	276 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	HNRNPR	O43390	633 aa	Known RBP	4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PPFIA2	O75334	1257 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	WDR47	O94967	919 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	RHO	P08100	348 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CYP21A2	P08686	494 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	STAG3L1	P0CL83	205 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	LAG3	P18627	525 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	RXRA	P19793	462 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	HOXA5	P20719	270 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	UQCRFS1	P47985	274 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PAPOLA	P51003	745 aa	Known RBP	4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MPP1	Q00013	466 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	EIF2B5	Q13144	721 aa	Known RBP	4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TP53BP2	Q13625	1128 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CSHL1	Q14406	222 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	KRTAP19-4	Q3LI73	84 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TBC1D25	Q3MII6	688 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	GALNTL6	Q49A17	601 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ZNF484	Q5JVG2	852 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	RETSAT	Q6NUM9	610 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	INO80C	Q6PI98	192 aa	Predicted RBP	4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ANKS1B	Q7Z6G8	1248 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TRABD2A	Q86V40	505 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	CAND1	Q86VP6	1230 aa	Known RBP	4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	TTC30A	Q86WT1	665 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MCEMP1	Q8IX19	187 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ABCA7	Q8IZY2	2146 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	ZNF276	Q8N554	614 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	B3GALNT2	Q8NCR0	500 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	PPHLN1	Q8NEY8	458 aa	Known RBP	4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	MYCBPAP	Q8TBZ2	947 aa		4.86	□□□□□ -1.63
ECHDC1-223	ENST00000534442	SMG7	Q92540	1137 aa	Known RBP	4.86	□□□□□ -1.63

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