RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 TMPRSS7Q7RTY8 843 aa30.5■■■□□ 2.47
SSSCA1-207ENST00000533115 TC2NQ8N9U0 490 aa30.5■■■□□ 2.47
SSSCA1-207ENST00000533115 RFFLQ8WZ73 363 aa30.5■■■□□ 2.47
SSSCA1-207ENST00000533115 FAF2Q96CS3 445 aa30.5■■■□□ 2.47
SSSCA1-207ENST00000533115 SCUBE2Q9NQ36 999 aa30.5■■■□□ 2.47
SSSCA1-207ENST00000533115 INTUQ9ULD6 942 aa30.5■■■□□ 2.47
SSSCA1-207ENST00000533115 TRIM38O00635 465 aa30.49■■■□□ 2.47
SSSCA1-207ENST00000533115 TOR1BO14657 336 aa30.49■■■□□ 2.47
SSSCA1-207ENST00000533115 GARSP41250 739 aaKnown RBP30.49■■■□□ 2.47
SSSCA1-207ENST00000533115 MMP13P45452 471 aa30.49■■■□□ 2.47
SSSCA1-207ENST00000533115 SEMG2Q02383 582 aa30.49■■■□□ 2.47
SSSCA1-207ENST00000533115 GALNT2Q10471 571 aa30.49■■■□□ 2.47
SSSCA1-207ENST00000533115 LRRC14Q15048 493 aa30.49■■■□□ 2.47
SSSCA1-207ENST00000533115 CCNI2Q6ZMN8 369 aaPredicted RBP30.49■■■□□ 2.47
SSSCA1-207ENST00000533115 TDRD6O60522 2096 aaKnown RBP30.49■■■□□ 2.47
SSSCA1-207ENST00000533115 PTPRBP23467 1997 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 SHROOM3Q8TF72 1996 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 LRRK1Q38SD2 2015 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 CFAP69A5D8W1 941 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 C1SP09871 688 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 NME1P15531 152 aaKnown RBP30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 KDELR1P24390 212 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 ACADVLP49748 655 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 THOP1P52888 689 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 ZNF211Q13398 564 aaPredicted RBP30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 PTK2BQ14289 1009 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 AGERQ15109 404 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 IRF4Q15306 451 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 PROX2Q3B8N5 592 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 TEX26Q8N6G2 289 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 OR4C6Q8NH72 309 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 RAPGEF5Q92565 580 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 NOD2Q9HC29 1040 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 PCDHGC4Q9Y5F7 938 aa30.48■■■□□ 2.47
SSSCA1-207ENST00000533115 USP24Q9UPU5 2620 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 H3BM21 787 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 HTRA2O43464 458 aaPredicted RBP30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 SIGLEC6O43699 453 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 LZTS3O60299 673 aaPredicted RBP30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 SOCS5O75159 536 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 RFPL3O75679 317 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 CKMT2P17540 419 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 MAXP61244 160 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 WSCD2Q2TBF2 565 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 HS1BP3Q53T59 392 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 RALGPS1Q5JS13 557 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 DHRS13Q6UX07 377 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 GALNT15Q8N3T1 639 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 PQLC3Q8N755 202 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 SPOCK2Q92563 424 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 RBSNQ9H1K0 784 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 KLF15Q9UIH9 416 aa30.47■■■□□ 2.47
SSSCA1-207ENST00000533115 IGF2RP11717 2491 aa30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 A0A1W2PQ67 120 aa30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 TMEM8BA6NDV4 472 aa30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 NEMP2A6NFY4 417 aa30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 FFAR2O15552 330 aa30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 GIMD1P0DJR0 217 aa30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 CDK4P11802 303 aa30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 RALGDSQ12967 914 aa30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 EIF2B5Q13144 721 aaKnown RBP30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 TCEAL1Q15170 157 aa30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 SMAD1Q15797 465 aaKnown RBP30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 IFI16Q16666 785 aaKnown RBP30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 DPPA4Q7L190 304 aa30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 KDF1Q8NAX2 398 aaPredicted RBP30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 NT5MQ9NPB1 228 aa30.46■■■□□ 2.47
SSSCA1-207ENST00000533115 PLXNB3Q9ULL4 1909 aa30.45■■■□□ 2.47
SSSCA1-207ENST00000533115 KMT2BQ9UMN6 2715 aaPredicted RBP30.45■■■□□ 2.47
SSSCA1-207ENST00000533115 MAP3K6O95382 1288 aa30.45■■■□□ 2.47
SSSCA1-207ENST00000533115 ALPPL2P10696 532 aa30.45■■■□□ 2.47
SSSCA1-207ENST00000533115 JUNDP17535 347 aa30.45■■■□□ 2.47
SSSCA1-207ENST00000533115 TIGD7Q6NT04 549 aaPredicted RBP30.45■■■□□ 2.47
SSSCA1-207ENST00000533115 LIPIQ6XZB0 460 aa30.45■■■□□ 2.47
SSSCA1-207ENST00000533115 ZNF548Q8NEK5 533 aaPredicted RBP30.45■■■□□ 2.47
SSSCA1-207ENST00000533115 PDCD6IPQ8WUM4 868 aaKnown RBP30.45■■■□□ 2.47
SSSCA1-207ENST00000533115 RNF157Q96PX1 679 aa30.45■■■□□ 2.47
SSSCA1-207ENST00000533115 NLGN3Q9NZ94 848 aa30.45■■■□□ 2.47
SSSCA1-207ENST00000533115 LRRD1A4D1F6 860 aa30.44■■■□□ 2.46
SSSCA1-207ENST00000533115 SCAMP1O15126 338 aa30.44■■■□□ 2.46
SSSCA1-207ENST00000533115 MATN3O15232 486 aa30.44■■■□□ 2.46
SSSCA1-207ENST00000533115 ELFN1P0C7U0 828 aa30.44■■■□□ 2.46
SSSCA1-207ENST00000533115 CCNCP24863 283 aa30.44■■■□□ 2.46
SSSCA1-207ENST00000533115 ZNF75DP51815 510 aa30.44■■■□□ 2.46
SSSCA1-207ENST00000533115 GBE1Q04446 702 aa30.44■■■□□ 2.46
SSSCA1-207ENST00000533115 MACC1Q6ZN28 852 aa30.44■■■□□ 2.46
SSSCA1-207ENST00000533115 MAML1Q92585 1016 aa30.44■■■□□ 2.46
SSSCA1-207ENST00000533115 FATE1Q969F0 183 aa30.44■■■□□ 2.46
SSSCA1-207ENST00000533115 TSGA13Q96PP4 275 aa30.44■■■□□ 2.46
SSSCA1-207ENST00000533115 ZNF487B1APH4 448 aa30.43■■■□□ 2.46
SSSCA1-207ENST00000533115 CPP00450 1065 aa30.43■■■□□ 2.46
SSSCA1-207ENST00000533115 MX2P20592 715 aa30.43■■■□□ 2.46
SSSCA1-207ENST00000533115 ACP1P24666 158 aa30.43■■■□□ 2.46
SSSCA1-207ENST00000533115 SLC1A1P43005 524 aa30.43■■■□□ 2.46
SSSCA1-207ENST00000533115 MAGEA1P43355 309 aa30.43■■■□□ 2.46
SSSCA1-207ENST00000533115 PEX5P50542 639 aa30.43■■■□□ 2.46
SSSCA1-207ENST00000533115 TRAF2Q12933 501 aa30.43■■■□□ 2.46
SSSCA1-207ENST00000533115 ILKQ13418 452 aa30.43■■■□□ 2.46
SSSCA1-207ENST00000533115 LRRC38Q5VT99 294 aa30.43■■■□□ 2.46
SSSCA1-207ENST00000533115 BTN2A2Q8WVV5 523 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms