RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 PRKD1Q15139 912 aaPredicted RBP20.01■□□□□ 0.79
CPSF1-209ENST00000532725 HLA-BQ31612 363 aa20.01■□□□□ 0.79
CPSF1-209ENST00000532725 FAM182AQ5T1J6 154 aa20.01■□□□□ 0.79
CPSF1-209ENST00000532725 CFAP58Q5T655 872 aa20.01■□□□□ 0.79
CPSF1-209ENST00000532725 AADACL2Q6P093 401 aa20.01■□□□□ 0.79
CPSF1-209ENST00000532725 IL27RAQ6UWB1 636 aa20.01■□□□□ 0.79
CPSF1-209ENST00000532725 UBL4BQ8N7F7 174 aa20.01■□□□□ 0.79
CPSF1-209ENST00000532725 UBE2Q2Q8WVN8 375 aa20.01■□□□□ 0.79
CPSF1-209ENST00000532725 LENG8Q96PV6 779 aaPredicted RBP20.01■□□□□ 0.79
CPSF1-209ENST00000532725 KLF6Q99612 283 aaPredicted RBP20.01■□□□□ 0.79
CPSF1-209ENST00000532725 DNAAF2Q9NVR5 837 aaKnown RBP20.01■□□□□ 0.79
CPSF1-209ENST00000532725 HS3ST3A1Q9Y663 406 aa20.01■□□□□ 0.79
CPSF1-209ENST00000532725 DCHS1Q96JQ0 3298 aa20.01■□□□□ 0.79
CPSF1-209ENST00000532725 PLXNA2O75051 1894 aa20.01■□□□□ 0.79
CPSF1-209ENST00000532725 ASCC3Q8N3C0 2202 aaKnown RBP20■□□□□ 0.79
CPSF1-209ENST00000532725 A0A1W2PQ67 120 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 TLR4O00206 839 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 RAD51BO15315 384 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 NRDCO43847 1150 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 PRKCGP05129 697 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 HNRNPA2B1P22626 353 aaKnown RBP20■□□□□ 0.79
CPSF1-209ENST00000532725 CTSKP43235 329 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 SGCGQ13326 291 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 ERAP2Q6P179 960 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 ADAT2Q7Z6V5 191 aaKnown RBP20■□□□□ 0.79
CPSF1-209ENST00000532725 IQCHQ86VS3 1027 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 TFB1MQ8WVM0 346 aaKnown RBP20■□□□□ 0.79
CPSF1-209ENST00000532725 SKA1Q96BD8 255 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 GAREM1Q9H706 876 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 IL21RQ9HBE5 538 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 FZD3Q9NPG1 666 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 LZTFL1Q9NQ48 299 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 HAUS2Q9NVX0 235 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 PPP2R2CQ9Y2T4 447 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 PCDHB9Q9Y5E1 797 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 RAI2Q9Y5P3 530 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 CABIN1Q9Y6J0 2220 aa20■□□□□ 0.79
CPSF1-209ENST00000532725 APOC4-APOC2K7ER74 178 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 KCNK3O14649 394 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 FZD6O60353 706 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 NEBLO76041 1014 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 PGLSO95336 258 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 APOC2P02655 101 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 AKT2P31751 481 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 C21orf59P57076 290 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 SEMG2Q02383 582 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 OVGP1Q12889 678 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 TEX44Q53QW1 395 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 SLC45A4Q5BKX6 768 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 ZC3H18Q86VM9 953 aaKnown RBP19.99■□□□□ 0.79
CPSF1-209ENST00000532725 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.99■□□□□ 0.79
CPSF1-209ENST00000532725 CXorf40AQ8TE69 158 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 PIH1D2Q8WWB5 315 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 CENPTQ96BT3 561 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 HAUS1Q96CS2 278 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 PDLIM2Q96JY6 352 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 BMFQ96LC9 184 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 WRAP53Q9BUR4 548 aaKnown RBP19.99■□□□□ 0.79
CPSF1-209ENST00000532725 PHTF1Q9UMS5 762 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 PPIL1Q9Y3C6 166 aa19.99■□□□□ 0.79
CPSF1-209ENST00000532725 CFAP69A5D8W1 941 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 OPHN1O60890 802 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 TM7SF2O76062 418 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 MMP2P08253 660 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 PDHA1P08559 390 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 MMP12P39900 470 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 CETN2P41208 172 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 CLDN2P57739 230 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 FAM193AP78312 1265 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 RALGDSQ12967 914 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 ZNF211Q13398 564 aaPredicted RBP19.98■□□□□ 0.79
CPSF1-209ENST00000532725 XRCC4Q13426 336 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 ZNF423Q2M1K9 1284 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 UAP1L1Q3KQV9 507 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 ARMC12Q5T9G4 340 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 ABI3BPQ7Z7G0 1075 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 SPATS2Q86XZ4 545 aaKnown RBP19.98■□□□□ 0.79
CPSF1-209ENST00000532725 PDCD6IPQ8WUM4 868 aaKnown RBP19.98■□□□□ 0.79
CPSF1-209ENST00000532725 KLHDC7BQ96G42 594 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 MYOCQ99972 504 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 CEP41Q9BYV8 373 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 SEPT10Q9P0V9 454 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 TTLL3Q9Y4R7 772 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 ANKRD36A6QL64 1941 aa19.98■□□□□ 0.79
CPSF1-209ENST00000532725 CNOT1A5YKK6 2376 aaKnown RBP19.98■□□□□ 0.79
CPSF1-209ENST00000532725 DCDC2BA2VCK2 349 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 HACD1B0YJ81 288 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 H0Y8X5 98 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 TJP3O95049 919 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 CER1O95813 267 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 PRLP01236 227 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 PTPN3P26045 913 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 LIG3P49916 1009 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 NXPH1P58417 271 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 WASHC5Q12768 1159 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 SLC14A1Q13336 389 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 NOMO1Q15155 1222 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 GCNT7Q6ZNI0 430 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 DPPA4Q7L190 304 aa19.97■□□□□ 0.79
CPSF1-209ENST00000532725 FAM174AQ8TBP5 190 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms