RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 CXorf40AQ8TE69 158 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 SNX19Q92543 992 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 RMDN1Q96DB5 314 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 LOXL4Q96JB6 756 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 FEM1CQ96JP0 617 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 HSPA12BQ96MM6 686 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 SRPK1Q96SB4 655 aaKnown RBP11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 C1QTNF7Q9BXJ2 289 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 DUSP15Q9H1R2 295 aaPredicted RBP11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 CD93Q9NPY3 652 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 PAK5Q9P286 719 aa11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 MBD1Q9UIS9 605 aaPredicted RBP11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 SMG5Q9UPR3 1016 aaKnown RBP11.92□□□□□ -0.5
PPFIA1-220ENST00000532024 EML5Q05BV3 1969 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 ERI2A8K979 691 aaKnown RBP11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 PMPCBO75439 489 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 FSBPO95073 299 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 MMP2P08253 660 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 TIMP2P16035 220 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 BCKDHBP21953 392 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 PSMB4P28070 264 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 CD68P34810 354 aaPredicted RBP11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 FDFT1P37268 417 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 LMAN1P49257 510 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 CDK18Q07002 472 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 TUBB2AQ13885 445 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 KIAA0895LQ68EN5 471 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 CCDC137Q6PK04 289 aaKnown RBP11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 CYP2U1Q7Z449 544 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 PRPF39Q86UA1 669 aaKnown RBP11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 TRIM69Q86WT6 500 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 CREG2Q8IUH2 290 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 TMEFF1Q8IYR6 380 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 RGL4Q8IZJ4 473 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 LPCAT1Q8NF37 534 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 IPMKQ8NFU5 416 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 SPATA22Q8NHS9 363 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 TUBB2BQ9BVA1 445 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 PCDH12Q9NPG4 1184 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 SUSD2Q9UGT4 822 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 GMEB2Q9UKD1 530 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 CHKBQ9Y259 395 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 FADS3Q9Y5Q0 445 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 ANKRD36A6QL64 1941 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 FANCMQ8IYD8 2048 aa11.91□□□□□ -0.5
PPFIA1-220ENST00000532024 METTL12A8MUP2 240 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 F5H423 210 aaPredicted RBP11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 RIOK3O14730 519 aaKnown RBP11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 AREL1O15033 823 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 RNGTTO60942 597 aaKnown RBP11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 URI1O94763 535 aaPredicted RBP11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 ECEL1O95672 775 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 NDST3O95803 873 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 MT-CYBP00156 380 aaPredicted RBP11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 EPOP01588 193 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 LMNAP02545 664 aaKnown RBP11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 ELFN1P0C7U0 828 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 GNSP15586 552 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 HLA-DPA1P20036 260 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 VIPR1P32241 457 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 HOXD12P35452 270 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 COILP38432 576 aaPredicted RBP11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 MMP12P39900 470 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 ABL2P42684 1182 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 GDF10P55107 478 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 WNT3AP56704 352 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 TAS2R38P59533 333 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 SGCGQ13326 291 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 ARHGEF7Q14155 803 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 PPP1R7Q15435 360 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 LRRC73Q5JTD7 316 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 DPPA4Q7L190 304 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 ARMCX6Q7L4S7 300 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 LINC00523Q86TU6 105 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 HORMAD1Q86X24 394 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 FRMD1Q8N878 549 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 CCHCR1Q8TD31 782 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 TADA1Q96BN2 335 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 SCRN2Q96FV2 425 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 MLPHQ9BV36 600 aaPredicted RBP11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 C6orf106Q9H6K1 298 aaPredicted RBP11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 LRRC40Q9H9A6 602 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 FAM86C1Q9NVL1 165 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 KCTD5Q9NXV2 234 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 SMARCAL1Q9NZC9 954 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 UBP1Q9NZI7 540 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 DMTF1Q9Y222 760 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 PCDHGA5Q9Y5G8 931 aa11.9□□□□□ -0.5
PPFIA1-220ENST00000532024 A0A0J9YYE9 177 aa11.89□□□□□ -0.51
PPFIA1-220ENST00000532024 A0A1W2PQU0 124 aa11.89□□□□□ -0.51
PPFIA1-220ENST00000532024 CAPN8A6NHC0 703 aa11.89□□□□□ -0.51
PPFIA1-220ENST00000532024 PRR5-ARHGAP8B1AHC4 643 aa11.89□□□□□ -0.51
PPFIA1-220ENST00000532024 ANKRD66B4E2M5 251 aa11.89□□□□□ -0.51
PPFIA1-220ENST00000532024 FZD6O60353 706 aa11.89□□□□□ -0.51
PPFIA1-220ENST00000532024 TRBC1P01850 177 aa11.89□□□□□ -0.51
PPFIA1-220ENST00000532024 FGF1P05230 155 aa11.89□□□□□ -0.51
PPFIA1-220ENST00000532024 ZNF30P17039 623 aa11.89□□□□□ -0.51
PPFIA1-220ENST00000532024 CD27P26842 260 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms