RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 KIAA1524Q8TCG1 905 aa18.1■□□□□ 0.49
PTPN11-204ENST00000531326 KRT35Q92764 455 aa18.1■□□□□ 0.49
PTPN11-204ENST00000531326 IFT43Q96FT9 208 aa18.1■□□□□ 0.49
PTPN11-204ENST00000531326 PPP1R16AQ96I34 528 aa18.1■□□□□ 0.49
PTPN11-204ENST00000531326 APOLD1Q96LR9 279 aa18.1■□□□□ 0.49
PTPN11-204ENST00000531326 SLC17A9Q9BYT1 436 aa18.1■□□□□ 0.49
PTPN11-204ENST00000531326 CEP44Q9C0F1 390 aa18.1■□□□□ 0.49
PTPN11-204ENST00000531326 KLC2Q9H0B6 622 aa18.1■□□□□ 0.49
PTPN11-204ENST00000531326 NOL6Q9H6R4 1146 aaKnown RBP18.1■□□□□ 0.49
PTPN11-204ENST00000531326 ATP13A1Q9HD20 1204 aa18.1■□□□□ 0.49
PTPN11-204ENST00000531326 LZTFL1Q9NQ48 299 aa18.1■□□□□ 0.49
PTPN11-204ENST00000531326 NLGN3Q9NZ94 848 aa18.1■□□□□ 0.49
PTPN11-204ENST00000531326 RCOR3Q9P2K3 495 aaPredicted RBP18.1■□□□□ 0.49
PTPN11-204ENST00000531326 DNAI1Q9UI46 699 aa18.1■□□□□ 0.49
PTPN11-204ENST00000531326 FCF1Q9Y324 198 aaKnown RBP18.1■□□□□ 0.49
PTPN11-204ENST00000531326 FADS3Q9Y5Q0 445 aa18.1■□□□□ 0.49
PTPN11-204ENST00000531326 HS3ST3A1Q9Y663 406 aa18.1■□□□□ 0.49
PTPN11-204ENST00000531326 C3orf70A6NLC5 250 aaPredicted RBP18.09■□□□□ 0.49
PTPN11-204ENST00000531326 A6NNZ2 444 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 OPA1O60313 960 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 C1QL1O75973 258 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 NEBLO76041 1014 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 PAK4O96013 591 aaPredicted RBP18.09■□□□□ 0.49
PTPN11-204ENST00000531326 AMPD1P23109 780 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 KDELR1P24390 212 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 ITGB7P26010 798 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 CCNHP51946 323 aaPredicted RBP18.09■□□□□ 0.49
PTPN11-204ENST00000531326 GNA12Q03113 381 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 FZD2Q14332 565 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 HS1BP3Q53T59 392 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 CARD16Q5EG05 197 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 RETSATQ6NUM9 610 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 KYAT3Q6YP21 454 aaKnown RBP18.09■□□□□ 0.49
PTPN11-204ENST00000531326 PARS2Q7L3T8 475 aaKnown RBP18.09■□□□□ 0.49
PTPN11-204ENST00000531326 PTAR1Q7Z6K3 402 aaPredicted RBP18.09■□□□□ 0.49
PTPN11-204ENST00000531326 NT5DC3Q86UY8 548 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 REXO1L1PQ8IX06 675 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 PCDH20Q8N6Y1 951 aaKnown RBP18.09■□□□□ 0.49
PTPN11-204ENST00000531326 KCTD6Q8NC69 237 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 VOPP1Q96AW1 172 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 FAF2Q96CS3 445 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 FCRL3Q96P31 734 aaPredicted RBP18.09■□□□□ 0.49
PTPN11-204ENST00000531326 HEPHQ9BQS7 1158 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 ZNF670Q9BS34 389 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 ETNK2Q9NVF9 386 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 DNAJC28Q9NX36 388 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 PYCARDQ9ULZ3 195 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 MFHAS1Q9Y4C4 1052 aa18.09■□□□□ 0.49
PTPN11-204ENST00000531326 COL27A1Q8IZC6 1860 aaPredicted RBP18.09■□□□□ 0.49
PTPN11-204ENST00000531326 K7ESM1 405 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 SCAMP1O15126 338 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 ATXN7O15265 892 aaPredicted RBP18.08■□□□□ 0.48
PTPN11-204ENST00000531326 DAPK3O43293 454 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 KRT1P04264 644 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 CTNNA2P26232 953 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 CTNNA1P35221 906 aaKnown RBP18.08■□□□□ 0.48
PTPN11-204ENST00000531326 ACTN2P35609 894 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 ACVRL1P37023 503 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 DNA2P51530 1060 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 RPS21P63220 83 aaKnown RBP18.08■□□□□ 0.48
PTPN11-204ENST00000531326 TLE3Q04726 772 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 SLC20A2Q08357 652 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 TPRG1LQ5T0D9 272 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 KIAA1161Q6NSJ0 714 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 SYCE1Q8N0S2 351 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 UMODL1-AS1Q8N2C9 162 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 NPWQ8N729 165 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 FAM181AQ8N9Y4 354 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 FAM174AQ8TBP5 190 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 SLC39A7Q92504 469 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 FEM1CQ96JP0 617 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 KLF6Q99612 283 aaPredicted RBP18.08■□□□□ 0.48
PTPN11-204ENST00000531326 DDX56Q9NY93 547 aaKnown RBP18.08■□□□□ 0.48
PTPN11-204ENST00000531326 KLF15Q9UIH9 416 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 ATMQ13315 3056 aa18.08■□□□□ 0.48
PTPN11-204ENST00000531326 SPTY2D1-AS1A0A0U1RR47 76 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 LRRD1A4D1F6 860 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 AP1G1O43747 822 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 RAMP2O60895 175 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 FTCDO95954 541 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 MPOP05164 745 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 ALPPL2P10696 532 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 GKP32189 559 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 ANKRD20A8PQ5CZ79 823 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 ZFYVE27Q5T4F4 411 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 AFMIDQ63HM1 303 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 DCP2Q8IU60 420 aaKnown RBP18.07■□□□□ 0.48
PTPN11-204ENST00000531326 MAP7D3Q8IWC1 876 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 SPACA3Q8IXA5 215 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 KATNAL2Q8IYT4 538 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 ZNF548Q8NEK5 533 aaPredicted RBP18.07■□□□□ 0.48
PTPN11-204ENST00000531326 PCDH19Q8TAB3 1148 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 ARHGEF2Q92974 986 aaKnown RBP18.07■□□□□ 0.48
PTPN11-204ENST00000531326 TM6SF2Q9BZW4 377 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 MAGEH1Q9H213 219 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 ZDHHC6Q9H6R6 413 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 LRRC19Q9H756 370 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 GGT7Q9UJ14 662 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 PCDHA3Q9Y5H8 950 aa18.07■□□□□ 0.48
PTPN11-204ENST00000531326 NEMP2A6NFY4 417 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms