RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 ZNF180Q9UJW8 692 aa9.95□□□□□ -0.82
CTNND1-228ENST00000531007 INTS6Q9UL03 887 aaKnown RBP9.95□□□□□ -0.82
CTNND1-228ENST00000531007 FAM50BQ9Y247 325 aa9.95□□□□□ -0.82
CTNND1-228ENST00000531007 ACTL7BQ9Y614 415 aa9.95□□□□□ -0.82
CTNND1-228ENST00000531007 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.95□□□□□ -0.82
CTNND1-228ENST00000531007 DENND4AQ7Z401 1863 aa9.95□□□□□ -0.82
CTNND1-228ENST00000531007 KIF26AQ9ULI4 1882 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-228ENST00000531007 MYO18AQ92614 2054 aaKnown RBP9.95□□□□□ -0.82
CTNND1-228ENST00000531007 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-228ENST00000531007 TCRBV9S1A1TA0A576 114 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 WASH3PC4AMC7 463 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 MUSKO15146 869 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 TULP3O75386 442 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 POP4O95707 220 aaKnown RBP9.94□□□□□ -0.82
CTNND1-228ENST00000531007 SYF2O95926 243 aaKnown RBP9.94□□□□□ -0.82
CTNND1-228ENST00000531007 SRCP12931 536 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 GLDCP23378 1020 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 SERPINA4P29622 427 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 SSTR1P30872 391 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 GRIA1P42261 906 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 MSH2P43246 934 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 RECQLP46063 649 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-228ENST00000531007 GRIA4P48058 902 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 SERPINB9P50453 376 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 FAM193AP78312 1265 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 DLX2Q07687 328 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-228ENST00000531007 BCL2L1Q07817 233 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 KCTD19Q17RG1 926 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-228ENST00000531007 ITPRIPL2Q3MIP1 535 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 PDPK2PQ6A1A2 396 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 DENND5AQ6IQ26 1287 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 UNC5AQ6ZN44 842 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 ARFGAP2Q8N6H7 521 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.94□□□□□ -0.82
CTNND1-228ENST00000531007 BRSK1Q8TDC3 778 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 MYLIPQ8WY64 445 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 ITPKCQ96DU7 683 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 MTBPQ96DY7 904 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 MSANTD3Q96H12 275 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 GUCD1Q96NT3 240 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 WDR83Q9BRX9 315 aaKnown RBP9.94□□□□□ -0.82
CTNND1-228ENST00000531007 OSBPL1AQ9BXW6 950 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 NOD2Q9HC29 1040 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 SYBUQ9NX95 663 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 ELOVL2Q9NXB9 296 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 PSMC3IPQ9P2W1 217 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-228ENST00000531007 CLEC4EQ9ULY5 219 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 PLA2G4CQ9UP65 541 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 ERVW-1Q9UQF0 538 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 USP15Q9Y4E8 981 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-228ENST00000531007 RAI2Q9Y5P3 530 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 RPS6KL1Q9Y6S9 549 aa9.94□□□□□ -0.82
CTNND1-228ENST00000531007 IQANK1A0A1B0GTG1 560 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 FAM159BA6NKW6 160 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 C2orf81A6NN90 581 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 ANKRD66B4E2M5 251 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 F5H423 210 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-228ENST00000531007 HTRA2O43464 458 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-228ENST00000531007 FZD6O60353 706 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 SHBGP04278 402 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 INHBAP08476 426 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 ATXN1LP0C7T5 689 aaKnown RBP9.93□□□□□ -0.82
CTNND1-228ENST00000531007 PSMA3P25788 255 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 POLR2LP62875 67 aaKnown RBP9.93□□□□□ -0.82
CTNND1-228ENST00000531007 MGAT5Q09328 741 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 DNAJC3Q13217 504 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 HTR4Q13639 388 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 SPARCL1Q14515 664 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 CRYMQ14894 314 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 PCSK7Q16549 785 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 UGP2Q16851 508 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 SKIDA1Q1XH10 827 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 MYLK3Q32MK0 819 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 ANKRD20A4Q4UJ75 823 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 CARD16Q5EG05 197 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 TNFAIP8L3Q5GJ75 292 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 SIRPB2Q5JXA9 342 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 SYCP2LQ5T4T6 812 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 ARMC12Q5T9G4 340 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 EMC10Q5UCC4 262 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 KIAA0930Q6ICG6 404 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-228ENST00000531007 MRPL14Q6P1L8 145 aaKnown RBP9.93□□□□□ -0.82
CTNND1-228ENST00000531007 C22orf39Q6P5X5 142 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 LINGO4Q6UY18 593 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 EP400NLQ6ZTU2 488 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 SLC26A11Q86WA9 606 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 IGDCC3Q8IVU1 814 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 CCDC116Q8IYX3 515 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 AGGF1Q8N302 714 aaeCLIP9.93□□□□□ -0.82
CTNND1-228ENST00000531007 MPP5Q8N3R9 675 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 CALML6Q8TD86 181 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 DNASE1L2Q92874 299 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 ASIC4Q96FT7 647 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 CERS2Q96G23 380 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 CFAP36Q96G28 342 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 TRIB3Q96RU7 358 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 DHRS4Q9BTZ2 278 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 EBF3Q9H4W6 596 aa9.93□□□□□ -0.82
CTNND1-228ENST00000531007 UBE2ZQ9H832 354 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-228ENST00000531007 HPS4Q9NQG7 708 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms