RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 MCCC1Q96RQ3 725 aaPredicted RBP16.15■□□□□ 0.18
BRK1-201ENST00000530758 EPC1Q9H2F5 836 aa16.15■□□□□ 0.18
BRK1-201ENST00000530758 SEMA4AQ9H3S1 761 aa16.15■□□□□ 0.18
BRK1-201ENST00000530758 PCDH9Q9HC56 1237 aa16.15■□□□□ 0.18
BRK1-201ENST00000530758 PTPRZ1P23471 2315 aaPredicted RBP16.14■□□□□ 0.18
BRK1-201ENST00000530758 LRRC72A6NJI9 287 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 METTL12A8MUP2 240 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 ANKRD66B4E2M5 251 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 ZNF500O60304 480 aaPredicted RBP16.14■□□□□ 0.17
BRK1-201ENST00000530758 BCKDHBP21953 392 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 RPL22P35268 128 aaKnown RBP16.14■□□□□ 0.17
BRK1-201ENST00000530758 ADRA1AP35348 466 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 ACTN2P35609 894 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 CCR5P51681 352 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 GEMP55040 296 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 CDK18Q07002 472 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 ELP6Q0PNE2 266 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 SRSF5Q13243 272 aaKnown RBP16.14■□□□□ 0.17
BRK1-201ENST00000530758 PRPSAP1Q14558 356 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 PLK5Q496M5 336 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 TMEM52BQ4KMG9 183 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 PMS2CLQ68D20 193 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 RANBP10Q6VN20 620 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 ARHGEF18Q6ZSZ5 1173 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 FAM124AQ86V42 546 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 GLIS1Q8NBF1 620 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 SUMF1Q8NBK3 374 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 OR14C36Q8NHC7 312 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 KIF18AQ8NI77 898 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 RUNDC3BQ96NL0 473 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 LYSMD1Q96S90 227 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 MLPHQ9BV36 600 aaPredicted RBP16.14■□□□□ 0.17
BRK1-201ENST00000530758 PAK5Q9P286 719 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 CHKBQ9Y259 395 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 INVSQ9Y283 1065 aa16.14■□□□□ 0.17
BRK1-201ENST00000530758 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.13■□□□□ 0.17
BRK1-201ENST00000530758 A0A0J9YYE9 177 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 ERI2A8K979 691 aaKnown RBP16.13■□□□□ 0.17
BRK1-201ENST00000530758 PSMD3O43242 534 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 LATO43561 262 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 NDUFS2O75306 463 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 CPP00450 1065 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 IFNB1P01574 187 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 TRBC1P01850 177 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 ETS1P14921 441 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 NFKBIAP25963 317 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 PSMB4P28070 264 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 FDFT1P37268 417 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 GRIA4P48058 902 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 WNT3AP56704 352 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 SIM2Q14190 667 aaPredicted RBP16.13■□□□□ 0.17
BRK1-201ENST00000530758 CFAP58Q5T655 872 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 TRIM69Q86WT6 500 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 RAVER1Q8IY67 606 aaKnown RBP16.13■□□□□ 0.17
BRK1-201ENST00000530758 NDUFAF2Q8N183 169 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.13■□□□□ 0.17
BRK1-201ENST00000530758 CCDC89Q8N998 374 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 SPATA4Q8NEY3 305 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 GRK7Q8WTQ7 553 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 ASB12Q8WXK4 309 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 DNASE2BQ8WZ79 361 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 FOXJ1Q92949 421 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 LOXL4Q96JB6 756 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 GPR174Q9BXC1 333 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 ADGRE3Q9BY15 652 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 DDX47Q9H0S4 455 aaKnown RBP16.13■□□□□ 0.17
BRK1-201ENST00000530758 ARNT2Q9HBZ2 717 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 PCDH12Q9NPG4 1184 aa16.13■□□□□ 0.17
BRK1-201ENST00000530758 SPTBN4Q9H254 2564 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 TBC1D3DA0A087WVF3 549 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 TBC1D3IA0A087WXS9 549 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 TBC1D3EA0A087X179 549 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 TBC1D3KA0A087X1G2 549 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 TBC1D3FA6NER0 549 aaPredicted RBP16.12■□□□□ 0.17
BRK1-201ENST00000530758 TBC1D3LB9A6J9 549 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 MAP3K13O43283 966 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 URI1O94763 535 aaPredicted RBP16.12■□□□□ 0.17
BRK1-201ENST00000530758 RHOBTB1O94844 696 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 NDST3O95803 873 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 IGHV4-34P06331 123 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 ATXN1LP0C7T5 689 aaKnown RBP16.12■□□□□ 0.17
BRK1-201ENST00000530758 TBC1D3HP0C7X1 549 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 ZSCAN5DPP0CG00 497 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 DEKP35659 375 aaKnown RBP16.12■□□□□ 0.17
BRK1-201ENST00000530758 NUDT1P36639 197 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 MMP12P39900 470 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 PTGIRP43119 386 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 RPL6Q02878 288 aaKnown RBP16.12■□□□□ 0.17
BRK1-201ENST00000530758 CREB5Q02930 508 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 SEMA5AQ13591 1074 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 AGERQ15109 404 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 QPCTQ16769 361 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 WHAMMP3Q1A5X7 153 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 TMEM259Q4ZIN3 620 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 KIAA0895LQ68EN5 471 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 TBC1D3GQ6DHY5 549 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 TBC1D3CQ6IPX1 549 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 KIAA1161Q6NSJ0 714 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 ERAP2Q6P179 960 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 DPPA4Q7L190 304 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms